Strain Fitness in Escherichia coli BW25113 around b4395

Experiment: Ying_Nucleobase14 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 3
4,630,865	-	trpR	b4393	0.25	-0.7
4,630,865	-	trpR	b4393	0.25	-1.2
4,630,865	-	trpR	b4393	0.25	-0.7
4,630,941	-	trpR	b4393	0.48	-0.5
4,630,941	-	trpR	b4393	0.48	-0.1
4,630,949	+	trpR	b4393	0.51	-0.4
4,630,952	-	trpR	b4393	0.52	-0.8
4,630,960	+	trpR	b4393	0.54	-1.4
4,630,992	+	trpR	b4393	0.64	-0.1
4,630,992	+	trpR	b4393	0.64	-0.2
4,631,035	+	trpR	b4393	0.77	-0.8
4,631,035	+	trpR	b4393	0.77	-0.2
4,631,225	+				-0.4
4,631,311	-	yjjX	b4394	0.11	+0.0
4,631,311	-	yjjX	b4394	0.11	+0.3
4,631,364	-	yjjX	b4394	0.21	+0.5
4,631,364	-	yjjX	b4394	0.21	+0.1
4,631,520	+	yjjX	b4394	0.51	+0.7
4,631,537	-	yjjX	b4394	0.55	+0.6
4,631,871	-				-1.6
4,631,878	+				-1.8
4,631,965	+	ytjC	b4395	0.22	-2.0
4,631,965	+	ytjC	b4395	0.22	-1.6
4,631,991	-	ytjC	b4395	0.26	-1.7
4,632,026	-	ytjC	b4395	0.32	-0.4
4,632,026	-	ytjC	b4395	0.32	-1.3
4,632,026	-	ytjC	b4395	0.32	-1.7
4,632,255	+	ytjC	b4395	0.67	-1.7
4,632,357	-	ytjC	b4395	0.83	-1.8
4,632,357	-	ytjC	b4395	0.83	-1.0
4,632,395	+	ytjC	b4395	0.89	-0.6
4,632,439	+				-0.3
4,632,439	+				-0.7
4,632,444	+				-0.6
4,632,444	+				-1.7
4,632,447	-				-0.3
4,632,447	-				-2.2
4,632,520	+				+0.0
4,632,520	+				-0.3
4,632,545	-				-1.9
4,632,550	-				-1.0
4,632,567	-	rob	b4396	0.12	-1.3
4,632,569	-	rob	b4396	0.12	-1.1
4,632,579	-	rob	b4396	0.13	-0.6
4,632,583	+	rob	b4396	0.14	-0.8
4,632,609	-	rob	b4396	0.17	-0.8
4,632,650	+	rob	b4396	0.21	-0.8
4,632,664	-	rob	b4396	0.23	-1.0
4,632,664	-	rob	b4396	0.23	-0.7
4,632,700	+	rob	b4396	0.27	-0.9
4,632,708	-	rob	b4396	0.28	-1.1
4,632,708	-	rob	b4396	0.28	-1.7
4,632,805	-	rob	b4396	0.39	-1.2
4,632,883	+	rob	b4396	0.48	-1.5
4,632,883	+	rob	b4396	0.48	-2.1
4,632,907	+	rob	b4396	0.51	-0.6
4,632,910	-	rob	b4396	0.51	-0.7
4,632,915	-	rob	b4396	0.52	-2.1
4,632,915	-	rob	b4396	0.52	-2.0
4,632,931	+	rob	b4396	0.54	-1.3
4,632,932	+	rob	b4396	0.54	-1.2
4,633,037	+	rob	b4396	0.66	-0.2
4,633,037	+	rob	b4396	0.66	+0.0
4,633,038	-	rob	b4396	0.66	-1.5
4,633,089	+	rob	b4396	0.72	-0.2
4,633,089	+	rob	b4396	0.72	-1.1
4,633,102	-	rob	b4396	0.73	-0.6
4,633,102	-	rob	b4396	0.73	-0.3
4,633,193	+	rob	b4396	0.84	-0.5
4,633,193	+	rob	b4396	0.84	-0.9
4,633,193	+	rob	b4396	0.84	-3.0
4,633,227	-	rob	b4396	0.88	-0.4
4,633,227	-	rob	b4396	0.88	+0.0
4,633,244	-	rob	b4396	0.90	-0.8
4,633,274	-				-0.9
4,633,306	-				-0.6
4,633,317	+				-0.9
4,633,364	-				+0.6
4,633,367	+				-1.5
4,633,441	-				+0.9
4,633,445	-				+1.4