Strain Fitness in Escherichia coli BW25113 around b4095

Experiment: Ying_Nucleobase14 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 3
4,313,115	-				-0.0
4,313,115	-				-0.2
4,313,127	+				-1.8
4,313,185	-	phnO	b4093	0.13	-0.1
4,313,195	-	phnO	b4093	0.16	+0.0
4,313,274	+	phnO	b4093	0.34	+0.0
4,313,433	+	phnO	b4093	0.70	-0.2
4,313,502	-	phnO	b4093	0.86	+0.5
4,313,502	-	phnO	b4093	0.86	-0.3
4,313,529	-				+0.4
4,313,529	-				-0.4
4,313,565	-				-0.3
4,313,634	+	phnN	b4094	0.15	-1.5
4,313,662	-	phnN	b4094	0.20	+0.3
4,313,821	+	phnN	b4094	0.49	+0.0
4,313,821	+	phnN	b4094	0.49	-0.1
4,313,881	-	phnN	b4094	0.60	-0.3
4,313,881	-	phnN	b4094	0.60	+0.7
4,313,956	-	phnN	b4094	0.73	-0.1
4,314,001	-	phnN	b4094	0.81	+0.4
4,314,043	+	phnN	b4094	0.89	-0.3
4,314,122	-				-2.0
4,314,213	+				-0.4
4,314,213	+				-0.0
4,314,357	-	phnM	b4095	0.22	-1.3
4,314,363	+	phnM	b4095	0.23	-0.0
4,314,396	+	phnM	b4095	0.26	+0.3
4,314,445	+	phnM	b4095	0.30	-0.7
4,314,445	+	phnM	b4095	0.30	-0.1
4,314,742	+	phnM	b4095	0.56	+0.0
4,314,819	+	phnM	b4095	0.63	-0.1
4,314,819	+	phnM	b4095	0.63	+0.5
4,314,822	-	phnM	b4095	0.63	+0.3
4,314,822	-	phnM	b4095	0.63	-0.5
4,314,857	-	phnM	b4095	0.66	+0.3
4,314,857	-	phnM	b4095	0.66	-0.8
4,315,006	-	phnM	b4095	0.79	+0.0
4,315,181	-				+0.3
4,315,192	-				-0.7
4,315,192	-				-0.7
4,315,200	-				-0.8
4,315,288	-				-2.6
4,315,408	+	phnL	b4096	0.25	+0.4
4,315,507	+	phnL	b4096	0.40	+1.2
4,315,516	-	phnL	b4096	0.41	-1.3
4,315,516	-	phnL	b4096	0.41	-1.0
4,315,585	-	phnL	b4096	0.51	-0.4
4,315,585	-	phnL	b4096	0.51	-0.3
4,315,720	-	phnL	b4096	0.71	+0.2
4,315,740	+	phnL	b4096	0.74	+3.2
4,315,740	+	phnL	b4096	0.74	-0.4
4,315,751	+	phnL	b4096	0.75	+0.2
4,316,095	+				+0.3
4,316,185	+	phnK	b4097	0.21	-0.2
4,316,185	+	phnK	b4097	0.21	+1.4
4,316,208	-	phnK	b4097	0.24	-2.5
4,316,211	+	phnK	b4097	0.24	-2.6