Strain Fitness in Escherichia coli BW25113 around b2744

Experiment: Ying_Nucleobase14 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 3
2,866,658	+	nlpD	b2742	0.90	-0.1
2,866,722	-				+0.8
2,866,836	-				-0.5
2,866,998	+	pcm	b2743	0.13	-0.7
2,867,354	+	pcm	b2743	0.70	-0.1
2,867,354	+	pcm	b2743	0.70	-1.2
2,867,354	+	pcm	b2743	0.70	+0.1
2,867,354	+	pcm	b2743	0.70	-0.5
2,867,354	+	pcm	b2743	0.70	+0.0
2,867,359	-	pcm	b2743	0.71	-1.3
2,867,541	-				-0.0
2,867,541	-				-0.1
2,867,616	-	surE	b2744	0.11	-1.7
2,867,623	+	surE	b2744	0.12	-0.4
2,867,631	+	surE	b2744	0.13	-1.3
2,867,672	-	surE	b2744	0.18	-1.1
2,867,701	+	surE	b2744	0.22	-0.2
2,867,709	-	surE	b2744	0.23	-0.4
2,867,747	+	surE	b2744	0.28	-0.7
2,867,747	+	surE	b2744	0.28	-0.5
2,867,862	-	surE	b2744	0.43	-0.7
2,867,862	-	surE	b2744	0.43	-0.9
2,867,862	-	surE	b2744	0.43	-0.6
2,867,883	+	surE	b2744	0.46	-0.4
2,867,883	+	surE	b2744	0.46	-0.6
2,868,038	-	surE	b2744	0.66	-1.0
2,868,043	-	surE	b2744	0.67	-0.2
2,868,043	-	surE	b2744	0.67	-0.3
2,868,152	+	surE	b2744	0.81	-1.0
2,868,266	-				-1.1
2,868,284	+				-1.0
2,868,332	-				-0.4
2,868,421	-	truD	b2745	0.14	-0.2
2,868,647	+	truD	b2745	0.35	-0.5
2,868,647	-	truD	b2745	0.35	-0.4
2,868,744	+	truD	b2745	0.44	-0.6
2,868,779	+	truD	b2745	0.48	+0.0
2,868,779	+	truD	b2745	0.48	+0.5
2,868,785	-	truD	b2745	0.48	-0.4
2,868,785	-	truD	b2745	0.48	-0.1
2,868,791	+	truD	b2745	0.49	-0.4
2,868,845	-	truD	b2745	0.54	+0.6
2,868,845	-	truD	b2745	0.54	-0.4
2,868,930	+	truD	b2745	0.62	-0.3
2,868,930	+	truD	b2745	0.62	+0.2
2,868,986	+	truD	b2745	0.68	-1.0
2,868,986	+	truD	b2745	0.68	+0.3
2,868,996	-	truD	b2745	0.68	+0.1
2,869,037	+	truD	b2745	0.72	+1.3
2,869,118	-	truD	b2745	0.80	-1.0
2,869,118	-	truD	b2745	0.80	-0.4
2,869,194	+	truD	b2745	0.87	-0.5
2,869,194	+	truD	b2745	0.87	-0.8
2,869,292	-				-0.4