Strain Fitness in Escherichia coli BW25113 around b1397

Experiment: Ying_Nucleobase14 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 3
1,457,921	-	paaH	b1395	0.59	-0.9
1,457,921	-	paaH	b1395	0.59	-0.5
1,457,941	+	paaH	b1395	0.60	-0.3
1,457,979	+	paaH	b1395	0.63	-0.3
1,458,061	-	paaH	b1395	0.69	+0.3
1,458,061	-	paaH	b1395	0.69	-2.2
1,458,104	-	paaH	b1395	0.72	+0.2
1,458,104	-	paaH	b1395	0.72	-0.6
1,458,138	+	paaH	b1395	0.74	-0.5
1,458,207	+	paaH	b1395	0.79	-0.4
1,458,487	-				-0.4
1,458,499	+				-0.1
1,458,558	-	paaI	b1396	0.15	+0.1
1,458,590	-	paaI	b1396	0.22	-0.9
1,458,590	-	paaI	b1396	0.22	-0.0
1,458,602	+	paaI	b1396	0.25	-0.4
1,458,602	+	paaI	b1396	0.25	-1.0
1,458,679	-	paaI	b1396	0.43	-0.1
1,458,689	-	paaI	b1396	0.46	-0.2
1,458,786	+	paaI	b1396	0.69	-0.2
1,458,909	-				+0.3
1,458,909	-				+0.3
1,458,914	-				+0.1
1,458,914	-				+1.7
1,459,088	+	paaJ	b1397	0.14	+0.1
1,459,188	+	paaJ	b1397	0.22	+0.5
1,459,188	+	paaJ	b1397	0.22	+0.2
1,459,425	+	paaJ	b1397	0.42	+0.3
1,459,425	+	paaJ	b1397	0.42	-0.5
1,459,608	+	paaJ	b1397	0.57	-0.2
1,459,647	+				+0.5
1,459,698	+	paaJ	b1397	0.65	+0.1
1,459,778	-	paaJ	b1397	0.71	+0.5
1,459,803	+	paaJ	b1397	0.73	+0.5
1,459,882	+	paaJ	b1397	0.80	+0.3
1,459,898	+	paaJ	b1397	0.81	+0.3
1,459,916	-	paaJ	b1397	0.83	-0.1
1,459,976	+	paaJ	b1397	0.88	+0.5
1,460,080	-				+0.9
1,460,092	+				+0.2