Strain Fitness in Escherichia coli BW25113 around b3968

Experiment: Ying_sugar7 rep C; time point 3

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntmurI and rrsB are separated by 373 nucleotidesrrsB and gltT are separated by 171 nucleotidesgltT and rrlB are separated by 193 nucleotides b3967: murI - glutamate racemase, required for biosynthesis of D-glutamate and peptidoglycan (VIMSS), at 4,163,451 to 4,164,308 murI b3968: rrsB - 16S ribosomal RNA (NCBI), at 4,164,682 to 4,166,223 rrsB b3969: gltT - tRNA-Glu (NCBI), at 4,166,395 to 4,166,470 gltT b3970: rrlB - 23S ribosomal RNA (NCBI), at 4,166,664 to 4,169,567 rrlB Position (kb) 4164 4165 4166 4167Strain fitness (log2 ratio) -1 0 1at 4166.248 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ying_sugar7 rep C; time point 3
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4,166,248 + +0.6

Or see this region's nucleotide sequence