Strain Fitness in Escherichia coli BW25113 around b4546
Experiment: Ying_sugar7 rep C; time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_sugar7 rep C; time point 3 |
---|---|---|---|---|---|
remove | |||||
2,525,116 | + | yfeH | b2410 | 0.15 | +0.3 |
2,525,248 | - | yfeH | b2410 | 0.28 | +0.1 |
2,525,454 | - | yfeH | b2410 | 0.49 | +0.2 |
2,525,454 | - | yfeH | b2410 | 0.49 | -0.5 |
2,525,454 | - | yfeH | b2410 | 0.49 | -0.0 |
2,525,454 | - | yfeH | b2410 | 0.49 | +0.3 |
2,525,613 | + | yfeH | b2410 | 0.65 | +0.5 |
2,525,709 | + | yfeH | b2410 | 0.74 | +1.0 |
2,525,727 | - | yfeH | b2410 | 0.76 | +0.5 |
2,525,727 | - | yfeH | b2410 | 0.76 | +0.1 |
2,525,887 | + | -1.0 | |||
2,525,942 | + | -0.2 | |||
2,526,092 | + | ypeB | b4546 | 0.59 | +0.4 |
Or see this region's nucleotide sequence