Strain Fitness in Escherichia coli BW25113 around b0077

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
84,635	+	leuO	b0076	0.28	-0.7
84,635	+	leuO	b0076	0.28	-0.1
84,644	-	leuO	b0076	0.29	+2.8
84,648	+	leuO	b0076	0.30	+0.1
84,648	+	leuO	b0076	0.30	+0.4
84,648	+	leuO	b0076	0.30	+0.6
84,648	+	leuO	b0076	0.30	+0.5
84,658	-	leuO	b0076	0.31	+0.8
84,658	-	leuO	b0076	0.31	+0.2
84,671	+	leuO	b0076	0.32	-1.4
84,696	+	leuO	b0076	0.35	+0.3
84,696	+	leuO	b0076	0.35	+0.4
84,728	+	leuO	b0076	0.38	+0.6
84,728	+	leuO	b0076	0.38	+0.2
84,728	+	leuO	b0076	0.38	+1.6
84,728	+	leuO	b0076	0.38	-0.7
84,731	+	leuO	b0076	0.38	+0.3
84,736	-	leuO	b0076	0.39	+1.8
84,736	-	leuO	b0076	0.39	-1.4
84,769	+	leuO	b0076	0.42	-1.1
84,786	+	leuO	b0076	0.44	+0.1
84,786	+	leuO	b0076	0.44	+0.1
84,799	+	leuO	b0076	0.46	-0.5
84,799	+	leuO	b0076	0.46	+0.1
84,805	-	leuO	b0076	0.46	+0.5
84,805	-	leuO	b0076	0.46	+1.6
84,825	+	leuO	b0076	0.48	-1.1
84,825	-	leuO	b0076	0.48	-0.4
84,827	+	leuO	b0076	0.49	-1.4
84,827	+	leuO	b0076	0.49	+0.3
84,851	-	leuO	b0076	0.51	-0.6
84,859	+	leuO	b0076	0.52	+0.1
84,867	+	leuO	b0076	0.53	-2.0
84,900	-	leuO	b0076	0.56	+2.4
84,918	+	leuO	b0076	0.58	+0.1
84,918	+	leuO	b0076	0.58	-0.6
84,922	-	leuO	b0076	0.59	+0.8
84,947	-	leuO	b0076	0.61	+0.3
84,947	-	leuO	b0076	0.61	-0.9
84,975	-	leuO	b0076	0.64	+0.5
84,975	-	leuO	b0076	0.64	-0.3
84,978	-	leuO	b0076	0.65	-1.6
84,978	-	leuO	b0076	0.65	-1.6
84,990	-	leuO	b0076	0.66	-0.1
85,019	-	leuO	b0076	0.69	+0.8
85,028	+	leuO	b0076	0.70	-0.8
85,028	+	leuO	b0076	0.70	-0.9
85,037	-	leuO	b0076	0.71	-1.0
85,040	+	leuO	b0076	0.71	-0.0
85,045	+	leuO	b0076	0.72	-0.3
85,045	+	leuO	b0076	0.72	-1.3
85,048	-	leuO	b0076	0.72	-0.3
85,049	+	leuO	b0076	0.72	-0.1
85,050	+	leuO	b0076	0.72	-0.1
85,051	-	leuO	b0076	0.72	-0.9
85,051	-	leuO	b0076	0.72	-0.4
85,055	+	leuO	b0076	0.73	-1.9
85,055	+	leuO	b0076	0.73	-1.4
85,055	+	leuO	b0076	0.73	-1.2
85,058	-	leuO	b0076	0.73	+1.3
85,063	-	leuO	b0076	0.74	+1.8
85,063	-	leuO	b0076	0.74	+0.8
85,063	-	leuO	b0076	0.74	-0.5
85,064	-	leuO	b0076	0.74	+0.2
85,065	-	leuO	b0076	0.74	+0.6
85,066	+	leuO	b0076	0.74	-1.5
85,068	+	leuO	b0076	0.74	+0.7
85,069	-	leuO	b0076	0.74	+0.5
85,070	+	leuO	b0076	0.74	-0.1
85,071	+	leuO	b0076	0.74	-0.4
85,071	+	leuO	b0076	0.74	+0.4
85,071	+	leuO	b0076	0.74	+1.4
85,074	-	leuO	b0076	0.75	+0.6
85,076	+	leuO	b0076	0.75	+0.1
85,076	-	leuO	b0076	0.75	+0.2
85,076	-	leuO	b0076	0.75	+0.7
85,077	+	leuO	b0076	0.75	-0.9
85,079	+	leuO	b0076	0.75	-0.1
85,079	+	leuO	b0076	0.75	-0.1
85,079	-	leuO	b0076	0.75	-0.7
85,086	+	leuO	b0076	0.76	-0.0
85,086	+	leuO	b0076	0.76	-0.0
85,087	-	leuO	b0076	0.76	+0.7
85,087	-	leuO	b0076	0.76	+1.9
85,087	-	leuO	b0076	0.76	+1.2
85,098	+	leuO	b0076	0.77	-0.5
85,098	+	leuO	b0076	0.77	-0.4
85,098	+	leuO	b0076	0.77	-0.5
85,099	-	leuO	b0076	0.77	+1.2
85,099	-	leuO	b0076	0.77	-0.3
85,099	-	leuO	b0076	0.77	-0.6
85,102	-	leuO	b0076	0.78	+0.7
85,104	+	leuO	b0076	0.78	+0.3
85,104	+	leuO	b0076	0.78	+0.5
85,104	+	leuO	b0076	0.78	+0.3
85,104	+	leuO	b0076	0.78	-0.1
85,104	+	leuO	b0076	0.78	+0.4
85,104	+	leuO	b0076	0.78	+0.1
85,104	+	leuO	b0076	0.78	+0.2
85,105	+	leuO	b0076	0.78	-0.9
85,105	+	leuO	b0076	0.78	-0.3
85,108	-	leuO	b0076	0.78	-0.4
85,108	-	leuO	b0076	0.78	-0.2
85,108	-	leuO	b0076	0.78	+1.6
85,108	-	leuO	b0076	0.78	+0.4
85,110	+	leuO	b0076	0.79	+0.4
85,112	-	leuO	b0076	0.79	-0.5
85,112	-	leuO	b0076	0.79	-1.0
85,112	-	leuO	b0076	0.79	-2.0
85,137	+	leuO	b0076	0.81	-0.3
85,137	+	leuO	b0076	0.81	+1.4
85,137	+	leuO	b0076	0.81	-1.0
85,137	+	leuO	b0076	0.81	-0.8
85,145	-	leuO	b0076	0.82	+1.8
85,145	-	leuO	b0076	0.82	+1.8
85,147	+	leuO	b0076	0.82	+0.1
85,157	+	leuO	b0076	0.83	-1.6
85,157	+	leuO	b0076	0.83	-0.1
85,157	+	leuO	b0076	0.83	-0.3
85,157	+	leuO	b0076	0.83	-0.9
85,216	-	leuO	b0076	0.90	+2.8
85,224	+				+0.3
85,224	+				-0.0
85,224	-				-1.2
85,227	+				-0.7
85,227	+				-1.4
85,234	+				+0.6
85,234	+				+0.3
85,234	+				+0.5
85,234	+				-0.6
85,240	+				-0.2
85,250	+				-0.6
85,250	+				-0.5
85,259	+				-0.7
85,266	-				+0.5
85,273	+				-1.8
85,277	+				+0.2
85,292	+				-1.1
85,327	+				-0.8
85,327	+				-0.0
85,327	+				-0.3
85,332	+				+0.0
85,332	+				-0.8
85,334	+				-0.3
85,388	+				-2.4
85,388	+				-2.1
85,548	-				-2.5
85,548	-				-4.4
85,582	-				-3.6
85,582	-				-3.6
85,584	+				+0.4
85,592	-				-4.5
85,620	+				+0.3
85,623	-				-3.6
85,626	+				-0.7
85,626	+				+0.7
85,626	+				+1.1
85,626	+				-0.5
85,626	-				-5.2
85,627	+				-0.9
85,627	+				-2.2
85,634	-				-2.5
85,634	-				-2.6
85,634	-				-3.1
85,634	-				-1.9
85,635	-				-5.1
85,635	-				-2.2
85,635	-				-3.2
85,635	-				-3.9
85,636	-				-4.5
85,638	-				-3.6
85,643	-				-5.1
85,643	-				-4.2
85,646	-				-3.3
85,646	-				-2.7
85,649	-				-2.7
85,649	-				-4.3
85,725	-				-0.2
85,725	-				-4.1
85,738	+				-4.3
85,738	+				-3.0
85,745	-				-4.4
85,745	-				-1.0
85,757	-				-2.5
85,765	+				-2.9
85,793	-				-4.8
85,794	-				-3.5
85,802	-				-3.7
85,802	-				-2.2
85,802	-				-1.6
85,802	-				-1.7
85,815	-	ilvI	b0077	0.11	-2.9
85,815	-	ilvI	b0077	0.11	-3.7
85,830	+	ilvI	b0077	0.12	-3.8
85,856	+	ilvI	b0077	0.13	-3.7
85,856	+	ilvI	b0077	0.13	-1.8
85,864	-	ilvI	b0077	0.14	-2.6
85,931	+	ilvI	b0077	0.17	-3.7
85,937	+	ilvI	b0077	0.18	-4.9
86,112	+	ilvI	b0077	0.28	-4.2
86,348	+	ilvI	b0077	0.42	-2.4
86,348	+	ilvI	b0077	0.42	-1.5
86,357	+	ilvI	b0077	0.42	-3.6
86,357	+	ilvI	b0077	0.42	-3.0
86,366	-	ilvI	b0077	0.43	-3.6
86,367	+	ilvI	b0077	0.43	-5.4
86,438	+	ilvI	b0077	0.47	-1.5
86,447	-	ilvI	b0077	0.47	-3.5
86,447	-	ilvI	b0077	0.47	-3.9
86,508	+	ilvI	b0077	0.51	-4.1
86,517	+	ilvI	b0077	0.51	-4.5
86,535	-	ilvI	b0077	0.52	-4.4
86,535	-	ilvI	b0077	0.52	-4.5
86,548	-	ilvI	b0077	0.53	-5.4
86,593	-	ilvI	b0077	0.56	-4.3
86,602	+	ilvI	b0077	0.56	-2.8
86,602	+	ilvI	b0077	0.56	-4.0
86,797	+	ilvI	b0077	0.68	-2.2
86,841	+	ilvI	b0077	0.70	-3.9
86,894	-	ilvI	b0077	0.73	-3.0
86,899	+	ilvI	b0077	0.74	-4.3
87,001	-	ilvI	b0077	0.79	-4.3
87,026	+	ilvI	b0077	0.81	-3.0
87,034	-	ilvI	b0077	0.81	-5.0
87,062	-	ilvI	b0077	0.83	-3.1
87,070	+	ilvI	b0077	0.83	-4.8
87,070	+	ilvI	b0077	0.83	-5.3
87,092	-	ilvI	b0077	0.85	-5.0
87,098	-	ilvI	b0077	0.85	-3.3
87,098	-	ilvI	b0077	0.85	-3.5
87,130	+	ilvI	b0077	0.87	-4.9
87,165	-	ilvI	b0077	0.89	-5.5
87,166	-	ilvI	b0077	0.89	-4.2
87,250	+				-2.6
87,285	+				-3.0
87,443	-	ilvH	b0078	0.17	-1.2
87,480	+	ilvH	b0078	0.25	-4.4
87,497	+	ilvH	b0078	0.28	-4.5
87,571	+	ilvH	b0078	0.43	-4.1
87,571	+	ilvH	b0078	0.43	-3.7
87,588	-	ilvH	b0078	0.47	-3.8
87,617	-	ilvH	b0078	0.53	-1.9
87,617	-	ilvH	b0078	0.53	-2.0
87,640	+	ilvH	b0078	0.58	-3.1
87,665	-	ilvH	b0078	0.63	-1.9
87,698	-	ilvH	b0078	0.69	-1.3
87,705	+	ilvH	b0078	0.71	-3.2
87,710	+	ilvH	b0078	0.72	-4.0
87,710	+	ilvH	b0078	0.72	-3.3
87,718	-	ilvH	b0078	0.73	-4.4
87,718	-	ilvH	b0078	0.73	-4.0
87,718	-	ilvH	b0078	0.73	-3.4
87,718	-	ilvH	b0078	0.73	-3.5
87,740	-	ilvH	b0078	0.78	-6.3
87,744	-	ilvH	b0078	0.79	-3.8
87,785	+	ilvH	b0078	0.87	-3.4
87,802	+				-1.1
87,815	-				-1.6
87,918	-				-0.4
87,951	-				-1.3
87,955	+				-0.1
88,009	+				+0.4
88,074	+				-0.9
88,085	+				-1.2
88,111	-				-1.6
88,111	-				-1.4
88,111	-				-1.9
88,111	-				-2.8
88,113	-				-1.9
88,187	+	fruR	b0080	0.16	-1.2
88,187	+	fruR	b0080	0.16	-1.2
88,259	-	fruR	b0080	0.23	-1.7
88,265	+	fruR	b0080	0.24	-1.4