Strain Fitness in Escherichia coli BW25113 around b2900

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
3,040,336	-				-0.4
3,040,374	-				-0.5
3,040,405	-				-1.1
3,040,555	-				-0.6
3,040,682	+	yqfA	b2899	0.26	-0.7
3,040,731	+	yqfA	b2899	0.33	+0.6
3,040,766	+	yqfA	b2899	0.39	+0.3
3,040,780	+	yqfA	b2899	0.41	+0.7
3,040,811	+	yqfA	b2899	0.45	+0.9
3,040,894	+	yqfA	b2899	0.58	-1.8
3,040,959	-	yqfA	b2899	0.68	+0.1
3,040,959	-	yqfA	b2899	0.68	+0.2
3,040,961	-	yqfA	b2899	0.68	+0.1
3,040,984	+	yqfA	b2899	0.72	+0.6
3,040,984	+	yqfA	b2899	0.72	+0.1
3,041,039	+	yqfA	b2899	0.80	-0.0
3,041,066	-	yqfA	b2899	0.84	+0.4
3,041,186	+				+0.6
3,041,186	+				+0.3
3,041,250	-				+0.5
3,041,449	+	yqfB	b2900	0.37	+0.2
3,041,479	-	yqfB	b2900	0.46	-1.2
3,041,480	-	yqfB	b2900	0.47	-2.6
3,041,529	+	yqfB	b2900	0.62	-1.4
3,041,529	+	yqfB	b2900	0.62	-2.3
3,041,581	+	yqfB	b2900	0.79	-0.8
3,041,607	-	yqfB	b2900	0.88	-0.8
3,041,790	+				+0.1
3,041,798	+				+0.6
3,041,798	+				+0.1
3,041,907	-	bglA	b2901	0.15	-0.1
3,041,907	-	bglA	b2901	0.15	-0.3
3,041,907	-	bglA	b2901	0.15	+0.6
3,041,920	+	bglA	b2901	0.16	+0.0
3,041,920	+	bglA	b2901	0.16	+0.4
3,042,006	-	bglA	b2901	0.22	-0.3
3,042,053	+	bglA	b2901	0.26	+0.2
3,042,067	+	bglA	b2901	0.27	+0.0
3,042,067	+	bglA	b2901	0.27	-0.9
3,042,083	-	bglA	b2901	0.28	+0.3
3,042,087	-	bglA	b2901	0.28	-1.8
3,042,110	-	bglA	b2901	0.30	-0.2
3,042,132	+	bglA	b2901	0.31	-0.6
3,042,140	-	bglA	b2901	0.32	-0.2
3,042,251	-	bglA	b2901	0.39	-0.1
3,042,251	-	bglA	b2901	0.39	-0.2
3,042,253	+	bglA	b2901	0.40	-0.3
3,042,280	+	bglA	b2901	0.41	+0.1
3,042,280	+	bglA	b2901	0.41	+0.5
3,042,280	+	bglA	b2901	0.41	-0.4
3,042,288	-	bglA	b2901	0.42	-0.3
3,042,288	-	bglA	b2901	0.42	+1.1
3,042,288	-	bglA	b2901	0.42	+0.5
3,042,288	-	bglA	b2901	0.42	-0.2
3,042,288	-	bglA	b2901	0.42	-0.7
3,042,410	-	bglA	b2901	0.50	+0.6
3,042,429	-	bglA	b2901	0.52	-0.1
3,042,434	-	bglA	b2901	0.52	+0.2
3,042,434	-	bglA	b2901	0.52	+0.1
3,042,466	+	bglA	b2901	0.54	+0.4
3,042,466	+	bglA	b2901	0.54	+0.4
3,042,524	-	bglA	b2901	0.58	-0.2
3,042,524	-	bglA	b2901	0.58	+0.2
3,042,531	+	bglA	b2901	0.59	+0.0
3,042,586	+	bglA	b2901	0.63	+0.7
3,042,603	-	bglA	b2901	0.64	+0.1