Strain Fitness in Escherichia coli BW25113 around b2686

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
2,809,748	-	emrA	b2685	0.25	-0.5
2,809,748	-	emrA	b2685	0.25	+0.4
2,809,806	-	emrA	b2685	0.30	-2.0
2,809,931	-	emrA	b2685	0.41	-2.5
2,810,041	+	emrA	b2685	0.50	-0.5
2,810,097	+	emrA	b2685	0.55	-1.2
2,810,097	+	emrA	b2685	0.55	-1.3
2,810,097	+	emrA	b2685	0.55	-2.4
2,810,100	-	emrA	b2685	0.55	-2.0
2,810,100	-	emrA	b2685	0.55	-4.0
2,810,103	-	emrA	b2685	0.56	-2.2
2,810,127	-	emrA	b2685	0.58	-1.8
2,810,147	-	emrA	b2685	0.60	-0.9
2,810,204	-	emrA	b2685	0.64	-1.2
2,810,320	+	emrA	b2685	0.74	-1.0
2,810,339	-	emrA	b2685	0.76	-2.6
2,810,417	-	emrA	b2685	0.83	-2.9
2,810,443	-	emrA	b2685	0.85	-1.5
2,810,480	+	emrA	b2685	0.88	-2.1
2,810,482	-	emrA	b2685	0.88	-1.8
2,810,482	-	emrA	b2685	0.88	-1.8
2,810,503	+	emrA	b2685	0.90	-2.0
2,810,533	+				-2.5
2,810,543	+				-1.5
2,810,543	+				-1.0
2,810,549	-				-2.3
2,810,621	+				-0.1
2,810,633	+				+0.1
2,810,716	+				-1.3
2,810,716	+				-1.1
2,810,724	-				-0.9
2,810,763	-				-0.7
2,810,764	+				-1.8
2,810,764	+				-1.4
2,810,921	+	emrB	b2686	0.18	-1.2
2,811,019	-	emrB	b2686	0.25	-1.7
2,811,019	-	emrB	b2686	0.25	-3.0
2,811,034	+	emrB	b2686	0.26	-0.2
2,811,034	+	emrB	b2686	0.26	-1.4
2,811,151	-	emrB	b2686	0.33	-0.8
2,811,196	-	emrB	b2686	0.36	-2.1
2,811,196	-	emrB	b2686	0.36	-0.2
2,811,310	+	emrB	b2686	0.44	-1.1
2,811,431	-	emrB	b2686	0.52	-1.6
2,811,436	-	emrB	b2686	0.52	-1.5
2,811,505	-	emrB	b2686	0.56	-1.4
2,811,507	-	emrB	b2686	0.56	-2.3
2,811,507	-	emrB	b2686	0.56	-3.2
2,811,528	+				-0.7
2,811,581	-	emrB	b2686	0.61	-0.6
2,811,778	-	emrB	b2686	0.74	-2.7
2,811,788	+	emrB	b2686	0.75	-2.9
2,811,788	+	emrB	b2686	0.75	-1.2
2,811,796	-	emrB	b2686	0.75	-0.8
2,811,889	-	emrB	b2686	0.81	-1.2
2,811,906	-	emrB	b2686	0.82	-1.7
2,811,983	+	emrB	b2686	0.87	-1.2
2,811,983	+	emrB	b2686	0.87	-2.6
2,812,033	-				-3.0
2,812,033	-				-1.5
2,812,113	-				-1.1
2,812,113	-				-0.5
2,812,127	+				-1.4
2,812,150	+				-0.9
2,812,150	+				+0.1
2,812,178	-				-1.0
2,812,327	+	luxS	b2687	0.17	+0.2
2,812,334	-	luxS	b2687	0.18	-0.2
2,812,375	-	luxS	b2687	0.26	-0.1
2,812,383	-	luxS	b2687	0.28	-0.6
2,812,383	-	luxS	b2687	0.28	+0.2
2,812,467	+	luxS	b2687	0.44	+0.9
2,812,470	-	luxS	b2687	0.45	-1.0
2,812,525	+	luxS	b2687	0.55	+1.0
2,812,525	+	luxS	b2687	0.55	-0.0
2,812,534	-	luxS	b2687	0.57	+1.0
2,812,541	-	luxS	b2687	0.58	-0.6
2,812,547	-	luxS	b2687	0.59	-1.2
2,812,585	+	luxS	b2687	0.67	+0.8
2,812,604	-	luxS	b2687	0.71	-0.8
2,812,604	-	luxS	b2687	0.71	-0.5
2,812,637	-	luxS	b2687	0.77	-0.3
2,812,719	+				+0.9
2,812,819	-				-0.5