Strain Fitness in Escherichia coli BW25113 around b2599

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
2,734,833	+				+0.9
2,734,848	-				+0.9
2,734,979	+				+0.4
2,734,996	-				+0.3
2,734,996	-				-0.1
2,735,339	+	yfiA	b2597	0.48	-0.1
2,735,512	+				-0.1
2,735,520	-				+0.3
2,735,555	-				+0.1
2,735,555	-				+0.2
2,735,688	+				+0.1
2,735,719	-				-4.9
2,735,782	+				-2.6
2,735,782	+				-4.5
2,735,877	+				-4.3
2,735,877	+				-3.5
2,735,928	-	pheA	b2599	0.14	-4.9
2,735,994	+	pheA	b2599	0.20	-4.6
2,736,002	-	pheA	b2599	0.20	-4.4
2,736,002	-	pheA	b2599	0.20	-5.3
2,736,085	+	pheA	b2599	0.27	-4.1
2,736,085	+	pheA	b2599	0.27	-4.1
2,736,139	-	pheA	b2599	0.32	-6.3
2,736,272	+	pheA	b2599	0.43	-4.9
2,736,382	+	pheA	b2599	0.53	-3.3
2,736,382	+	pheA	b2599	0.53	-3.6
2,736,390	-	pheA	b2599	0.54	-3.9
2,736,390	-	pheA	b2599	0.54	-4.3
2,736,390	-	pheA	b2599	0.54	-3.1
2,736,395	-	pheA	b2599	0.54	-5.7
2,736,409	-	pheA	b2599	0.55	-3.4
2,736,409	-	pheA	b2599	0.55	-3.9
2,736,411	-	pheA	b2599	0.55	-3.8
2,736,411	-	pheA	b2599	0.55	-2.5
2,736,534	-	pheA	b2599	0.66	-5.4
2,736,549	-	pheA	b2599	0.67	-4.7
2,736,567	-	pheA	b2599	0.69	-2.7
2,736,633	+	pheA	b2599	0.75	+0.0
2,736,634	-	pheA	b2599	0.75	-1.8
2,736,710	+	pheA	b2599	0.81	-0.2
2,736,710	+	pheA	b2599	0.81	+0.9
2,736,746	+	pheA	b2599	0.84	-0.5
2,736,905	-				+0.5
2,736,942	-				-0.5
2,736,952	-				+0.2
2,737,058	-				-5.2
2,737,175	-	tyrA	b2600	0.18	-4.7
2,737,294	+	tyrA	b2600	0.29	-3.2
2,737,399	-	tyrA	b2600	0.38	-4.1
2,737,589	-	tyrA	b2600	0.55	-6.2
2,737,698	-	tyrA	b2600	0.65	-4.3
2,737,698	-	tyrA	b2600	0.65	-3.5
2,737,712	-	tyrA	b2600	0.66	-5.9
2,737,753	-	tyrA	b2600	0.70	-4.0
2,737,753	-	tyrA	b2600	0.70	-4.9
2,737,877	-	tyrA	b2600	0.81	-5.6
2,737,877	-	tyrA	b2600	0.81	-6.4
2,737,890	-	tyrA	b2600	0.82	-6.1