Strain Fitness in Escherichia coli BW25113 around b1859

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
1,940,554	+				-2.3
1,940,831	-	znuC	b1858	0.19	-3.7
1,940,831	-	znuC	b1858	0.19	-1.2
1,940,844	+	znuC	b1858	0.21	-1.3
1,940,964	+	znuC	b1858	0.37	-1.5
1,940,970	-	znuC	b1858	0.38	-1.9
1,940,970	-	znuC	b1858	0.38	-0.6
1,940,972	-	znuC	b1858	0.38	-3.4
1,940,972	-	znuC	b1858	0.38	-3.9
1,941,053	-	znuC	b1858	0.49	-0.8
1,941,053	-	znuC	b1858	0.49	-0.7
1,941,081	-	znuC	b1858	0.52	-0.6
1,941,195	+	znuC	b1858	0.67	-1.9
1,941,208	-	znuC	b1858	0.69	-1.9
1,941,228	+	znuC	b1858	0.72	-1.5
1,941,385	-				-0.6
1,941,492	-				-0.6
1,941,587	+	znuB	b1859	0.19	-2.2
1,941,587	+	znuB	b1859	0.19	-1.6
1,941,589	+	znuB	b1859	0.19	-2.0
1,941,662	+	znuB	b1859	0.28	-0.5
1,941,662	+				-1.3
1,941,704	+	znuB	b1859	0.34	-2.4
1,941,712	-				-1.3
1,941,714	+	znuB	b1859	0.35	-1.6
1,941,749	+	znuB	b1859	0.40	-3.3
1,941,914	+	znuB	b1859	0.61	-3.2
1,941,914	+	znuB	b1859	0.61	-1.5
1,941,978	+	znuB	b1859	0.69	-2.4
1,942,038	+	znuB	b1859	0.76	-3.7
1,942,038	+	znuB	b1859	0.76	-1.6
1,942,094	+	znuB	b1859	0.83	-2.5
1,942,094	+	znuB	b1859	0.83	-2.2
1,942,156	-				+0.1
1,942,156	-				-1.2
1,942,184	+				-0.4
1,942,295	+				+0.4
1,942,295	+				+1.8
1,942,423	+				-1.6
1,942,445	-				-0.3
1,942,446	-				-1.9
1,942,806	+	ruvB	b1860	0.43	+0.1
1,942,985	+	ruvB	b1860	0.61	+1.2