Strain Fitness in Escherichia coli BW25113 around b1652
Experiment: Ying_sugar7 rep C; time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Ying_sugar7 rep C; time point 3 |
|---|---|---|---|---|---|
| remove | |||||
| 1,725,403 | + | nemA | b1650 | 0.66 | +0.7 |
| 1,725,437 | + | nemA | b1650 | 0.69 | -0.0 |
| 1,725,754 | + | -1.3 | |||
| 1,725,761 | - | +0.1 | |||
| 1,725,763 | - | +0.7 | |||
| 1,725,763 | - | -0.6 | |||
| 1,725,877 | - | +0.2 | |||
| 1,725,877 | - | +0.0 | |||
| 1,726,040 | - | gloA | b1651 | 0.44 | -0.0 |
| 1,726,072 | - | gloA | b1651 | 0.52 | +1.1 |
| 1,726,092 | + | gloA | b1651 | 0.57 | +0.0 |
| 1,726,185 | - | gloA | b1651 | 0.79 | +0.2 |
| 1,726,185 | - | gloA | b1651 | 0.79 | -0.9 |
| 1,727,342 | + | -0.2 | |||
| 1,727,625 | - | lhr | b1653 | 0.11 | +0.6 |
| 1,727,670 | + | lhr | b1653 | 0.12 | -0.8 |
| 1,727,670 | + | lhr | b1653 | 0.12 | -1.8 |
| 1,727,696 | + | lhr | b1653 | 0.13 | -0.5 |
| 1,727,696 | + | lhr | b1653 | 0.13 | +0.5 |
| 1,727,730 | - | lhr | b1653 | 0.13 | +0.4 |
| 1,727,735 | - | lhr | b1653 | 0.14 | -0.1 |
| 1,727,739 | + | lhr | b1653 | 0.14 | -0.5 |
| 1,727,739 | + | lhr | b1653 | 0.14 | -1.1 |
| 1,727,925 | + | lhr | b1653 | 0.18 | +0.8 |
Or see this region's nucleotide sequence