Strain Fitness in Escherichia coli BW25113 around b1629

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
1,704,048	+	rsxA	b1627	0.44	+0.9
1,704,090	-	rsxA	b1627	0.51	+0.8
1,704,235	-	rsxA	b1627	0.76	+1.3
1,704,376	+				+0.8
1,704,376	+				-0.1
1,704,377	-				-0.7
1,704,525	-	rsxB	b1628	0.26	+1.6
1,704,772	+	rsxB	b1628	0.69	+0.7
1,704,806	+	rsxB	b1628	0.75	+1.4
1,705,039	+				+1.2
1,705,042	-				+1.4
1,705,235	-	rsxC	b1629	0.13	+1.0
1,705,290	+	rsxC	b1629	0.16	+1.1
1,705,290	+	rsxC	b1629	0.16	-0.2
1,705,308	-	rsxC	b1629	0.16	+0.6
1,705,308	-	rsxC	b1629	0.16	-0.2
1,705,459	+	rsxC	b1629	0.23	+0.7
1,705,459	+	rsxC	b1629	0.23	-0.7
1,705,529	-	rsxC	b1629	0.26	+1.4
1,705,579	+	rsxC	b1629	0.29	-0.6
1,705,727	-	rsxC	b1629	0.35	+2.1
1,705,812	+	rsxC	b1629	0.39	+0.3
1,705,999	+	rsxC	b1629	0.48	+1.3
1,706,363	+	rsxC	b1629	0.64	+0.3
1,706,547	-	rsxC	b1629	0.72	+0.2
1,706,829	+	rsxC	b1629	0.85	+0.2
1,706,859	+	rsxC	b1629	0.86	+0.3
1,706,859	+	rsxC	b1629	0.86	+0.3
1,706,883	-	rsxC	b1629	0.87	+0.4
1,706,883	-	rsxC	b1629	0.87	+0.4
1,706,924	+	rsxC	b1629	0.89	-0.2
1,707,252	+				-0.7
1,707,252	+				+1.2
1,707,328	+	rsxD	b1630	0.15	+0.7
1,707,414	+	rsxD	b1630	0.23	+1.2
1,707,414	+	rsxD	b1630	0.23	+0.7
1,707,473	-	rsxD	b1630	0.29	+1.9
1,707,579	-	rsxD	b1630	0.39	+1.9
1,707,696	-	rsxD	b1630	0.50	+0.7
1,707,716	+	rsxD	b1630	0.52	+1.3
1,707,793	+	rsxD	b1630	0.59	+0.2
1,707,803	-	rsxD	b1630	0.60	+1.0
1,707,895	+	rsxD	b1630	0.69	-3.0
1,707,914	-	rsxD	b1630	0.71	+1.7
1,707,924	+	rsxD	b1630	0.72	+1.0
1,708,021	+	rsxD	b1630	0.81	+1.3
1,708,161	+				+0.3
1,708,161	+				+0.5