Strain Fitness in Escherichia coli BW25113 around b1141

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
1,199,013	-				+1.2
1,199,056	-	intE	b1140	0.14	+0.3
1,199,056	-	intE	b1140	0.14	+0.0
1,199,086	-	intE	b1140	0.16	-0.8
1,199,086	-	intE	b1140	0.16	+0.2
1,199,130	-	intE	b1140	0.20	-0.6
1,199,130	-	intE	b1140	0.20	-1.5
1,199,145	-	intE	b1140	0.22	-1.0
1,199,147	+	intE	b1140	0.22	+0.8
1,199,155	-	intE	b1140	0.22	-0.9
1,199,177	+	intE	b1140	0.24	-0.5
1,199,177	+	intE	b1140	0.24	+0.6
1,199,177	+	intE	b1140	0.24	-0.3
1,199,185	-	intE	b1140	0.25	+0.5
1,199,185	-	intE	b1140	0.25	+0.2
1,199,185	-	intE	b1140	0.25	-0.6
1,199,187	+	intE	b1140	0.25	+0.4
1,199,187	+	intE	b1140	0.25	-0.8
1,199,188	+	intE	b1140	0.25	-0.9
1,199,189	+	intE	b1140	0.25	+0.6
1,199,195	-	intE	b1140	0.26	+0.2
1,199,197	+	intE	b1140	0.26	-1.1
1,199,199	-	intE	b1140	0.26	+1.4
1,199,207	+	intE	b1140	0.27	+0.3
1,199,207	+	intE	b1140	0.27	+0.5
1,199,208	-	intE	b1140	0.27	-1.1
1,199,216	-	intE	b1140	0.28	-0.6
1,199,295	+	intE	b1140	0.35	-0.1
1,199,369	+	intE	b1140	0.41	-1.0
1,199,369	+	intE	b1140	0.41	-0.4
1,199,378	+	intE	b1140	0.42	+0.9
1,199,378	-	intE	b1140	0.42	+0.3
1,199,379	-	intE	b1140	0.42	-0.0
1,199,446	-	intE	b1140	0.48	-0.3
1,199,492	+	intE	b1140	0.52	+0.4
1,199,505	+	intE	b1140	0.53	+0.6
1,199,534	-	intE	b1140	0.56	-0.5
1,199,550	+	intE	b1140	0.57	+0.6
1,199,600	+	intE	b1140	0.62	-1.3
1,199,631	-	intE	b1140	0.65	+0.2
1,199,631	-	intE	b1140	0.65	+1.0
1,199,681	-	intE	b1140	0.69	-0.1
1,199,692	+	intE	b1140	0.70	-0.2
1,199,692	+	intE	b1140	0.70	+1.7
1,199,736	-	intE	b1140	0.74	+0.3
1,199,742	+	intE	b1140	0.74	-0.2
1,199,742	+	intE	b1140	0.74	+0.3
1,199,870	-	intE	b1140	0.86	+1.3
1,199,943	-				-0.3
1,199,943	-				-0.7
1,200,021	+				-0.5
1,200,088	+	ymfG	b1141	0.32	+1.2
1,200,127	-	ymfG	b1141	0.48	-0.3
1,200,191	-	ymfG	b1141	0.74	+0.3
1,200,236	+				+1.0
1,200,278	-				-1.1
1,200,298	+				+0.2
1,200,340	-				-1.1
1,200,347	+				-0.4
1,200,360	-				+0.3
1,200,368	-				+0.2
1,200,404	-				-1.5
1,200,475	-				-0.1
1,200,475	-				-0.3
1,200,482	+				+0.7
1,200,683	-				+0.5
1,200,770	-	ymfI	b1143	0.15	+0.3
1,200,919	+	ymfI	b1143	0.58	-0.1
1,201,109	-	ymfJ	b1144	0.36	+1.0
1,201,127	+	ymfJ	b1144	0.41	+0.1
1,201,127	+	ymfJ	b1144	0.41	-0.0