Strain Fitness in Escherichia coli BW25113 around b0827
Experiment: Ying_sugar7 rep C; time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_sugar7 rep C; time point 3 |
---|---|---|---|---|---|
remove | |||||
863,433 | + | mipB | b0825 | 0.86 | -0.2 |
863,554 | + | -1.2 | |||
863,625 | - | -0.0 | |||
863,673 | - | +0.5 | |||
863,881 | + | moeB | b0826 | 0.37 | +0.0 |
863,881 | + | moeB | b0826 | 0.37 | +0.3 |
863,980 | - | moeB | b0826 | 0.50 | -0.1 |
863,987 | + | moeB | b0826 | 0.51 | +0.6 |
864,031 | - | moeB | b0826 | 0.57 | +0.4 |
864,031 | - | moeB | b0826 | 0.57 | +0.4 |
864,040 | - | moeB | b0826 | 0.58 | -0.1 |
864,067 | + | moeB | b0826 | 0.62 | +0.5 |
864,071 | - | moeB | b0826 | 0.62 | -0.1 |
864,129 | + | moeB | b0826 | 0.70 | +0.5 |
864,167 | + | moeB | b0826 | 0.75 | +0.7 |
864,209 | - | moeB | b0826 | 0.81 | +0.3 |
864,209 | - | moeB | b0826 | 0.81 | -0.1 |
864,214 | - | moeB | b0826 | 0.81 | +0.4 |
864,271 | - | moeB | b0826 | 0.89 | +0.7 |
864,647 | + | moeA | b0827 | 0.24 | +0.6 |
864,770 | - | moeA | b0827 | 0.34 | -1.1 |
864,770 | - | moeA | b0827 | 0.34 | -0.9 |
864,814 | - | moeA | b0827 | 0.37 | -1.0 |
864,855 | + | moeA | b0827 | 0.41 | -0.2 |
864,945 | + | moeA | b0827 | 0.48 | +0.1 |
865,047 | + | moeA | b0827 | 0.56 | +0.6 |
865,064 | - | moeA | b0827 | 0.58 | -1.0 |
865,220 | + | moeA | b0827 | 0.70 | +0.4 |
865,243 | + | moeA | b0827 | 0.72 | -0.5 |
865,243 | + | moeA | b0827 | 0.72 | -1.3 |
865,278 | - | moeA | b0827 | 0.75 | -0.1 |
865,278 | - | -0.1 | |||
865,301 | - | moeA | b0827 | 0.77 | -0.1 |
865,527 | + | +0.5 | |||
865,527 | + | +0.5 | |||
865,535 | - | -0.5 | |||
865,561 | - | +0.3 | |||
865,646 | + | -0.5 | |||
865,646 | + | -0.0 | |||
865,648 | + | -0.6 | |||
865,771 | + | -0.4 | |||
865,771 | + | +0.6 | |||
865,875 | + | -0.6 | |||
865,883 | + | +0.0 | |||
866,064 | - | iaaA | b0828 | 0.28 | +0.5 |
866,149 | + | iaaA | b0828 | 0.37 | +0.1 |
866,246 | + | -0.9 | |||
866,424 | + | iaaA | b0828 | 0.66 | -0.4 |
866,432 | - | iaaA | b0828 | 0.66 | +0.2 |
866,537 | + | iaaA | b0828 | 0.77 | -0.6 |
Or see this region's nucleotide sequence