Strain Fitness in Escherichia coli BW25113 around b0097
Experiment: Ying_sugar7 rep C; time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Ying_sugar7 rep C; time point 3 |
|---|---|---|---|---|---|
| remove | |||||
| 107,420 | + | -2.1 | |||
| 107,425 | + | -0.8 | |||
| 107,435 | + | -0.8 | |||
| 107,458 | + | +0.2 | |||
| 107,461 | - | -0.4 | |||
| 107,471 | - | -2.6 | |||
| 107,565 | + | -0.3 | |||
| 107,565 | + | -0.5 | |||
| 107,635 | + | -0.0 | |||
| 107,640 | + | +0.1 | |||
| 107,772 | - | yacA | b0097 | 0.13 | -0.8 |
| 107,822 | + | yacA | b0097 | 0.23 | -0.5 |
| 107,951 | + | yacA | b0097 | 0.48 | -1.1 |
| 108,083 | + | yacA | b0097 | 0.74 | -0.9 |
| 108,083 | + | yacA | b0097 | 0.74 | -2.8 |
| 108,192 | + | -1.0 | |||
| 108,192 | + | -1.5 | |||
| 108,198 | + | -0.1 | |||
| 108,198 | + | +0.4 | |||
| 108,213 | + | -1.2 | |||
| 108,213 | + | +0.1 | |||
| 108,221 | + | -1.8 |
Or see this region's nucleotide sequence