Strain Fitness in Escherichia coli BW25113 around b4319

Experiment: Ying_sugar7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 3
4,545,345	+	fimD	b4317	0.84	+0.1
4,545,354	-	fimD	b4317	0.85	+1.2
4,545,354	-	fimD	b4317	0.85	-0.5
4,545,367	-	fimD	b4317	0.85	+0.0
4,545,391	-	fimD	b4317	0.86	+0.3
4,545,393	+	fimD	b4317	0.86	+0.5
4,545,401	-	fimD	b4317	0.87	+0.4
4,545,403	-	fimD	b4317	0.87	-0.1
4,545,468	-	fimD	b4317	0.89	-0.3
4,545,468	-	fimD	b4317	0.89	+0.1
4,545,485	+	fimD	b4317	0.90	-0.0
4,545,519	+				+0.1
4,545,555	-				+0.3
4,545,555	-				+0.5
4,545,565	+				+0.3
4,545,612	-				-0.5
4,545,724	+				+0.3
4,545,734	+				-0.8
4,545,759	+				-0.5
4,545,759	+				+0.5
4,545,874	+				+1.1
4,546,062	-	fimF	b4318	0.56	+1.0
4,546,062	-				+0.1
4,546,251	-				+0.3
4,546,251	-				+0.2
4,546,259	-				+1.1
4,546,289	-				+0.3
4,546,292	+				-0.1
4,546,365	-	fimG	b4319	0.11	+0.2
4,546,373	-	fimG	b4319	0.13	+0.1
4,546,373	-	fimG	b4319	0.13	+0.1
4,546,373	-	fimG	b4319	0.13	-0.5
4,546,411	+	fimG	b4319	0.20	+0.0
4,546,419	-	fimG	b4319	0.22	+0.1
4,546,429	-				+0.0
4,546,511	-	fimG	b4319	0.40	+0.2
4,546,511	-	fimG	b4319	0.40	+0.6
4,546,643	-	fimG	b4319	0.66	-0.0
4,546,647	+	fimG	b4319	0.67	+0.2
4,546,650	+	fimG	b4319	0.68	+0.0
4,546,657	-	fimG	b4319	0.69	-0.9
4,546,669	-	fimG	b4319	0.72	-1.3
4,546,669	-	fimG	b4319	0.72	+0.5
4,546,684	-	fimG	b4319	0.75	+0.2
4,546,794	+				-1.0
4,546,828	+				+0.6
4,546,859	-				-1.6
4,546,871	-				+0.1
4,546,874	-				-0.4
4,546,882	-				+0.3
4,546,882	-				+0.4
4,547,047	+	fimH	b4320	0.24	+1.7
4,547,047	+	fimH	b4320	0.24	-0.4
4,547,055	+	fimH	b4320	0.25	+0.1
4,547,055	+	fimH	b4320	0.25	+0.2
4,547,057	+	fimH	b4320	0.25	+0.3
4,547,057	+	fimH	b4320	0.25	+0.5
4,547,057	+	fimH	b4320	0.25	-0.8
4,547,059	+	fimH	b4320	0.25	-0.3
4,547,065	-	fimH	b4320	0.26	+0.3
4,547,066	-	fimH	b4320	0.26	-0.3
4,547,067	+	fimH	b4320	0.26	-0.0
4,547,080	+	fimH	b4320	0.28	-0.2
4,547,080	+	fimH	b4320	0.28	-0.0
4,547,080	+	fimH	b4320	0.28	-0.2
4,547,080	+	fimH	b4320	0.28	+0.6
4,547,145	+	fimH	b4320	0.35	-0.2
4,547,224	+	fimH	b4320	0.44	-0.5
4,547,232	-	fimH	b4320	0.44	+0.3
4,547,232	-	fimH	b4320	0.44	+0.2
4,547,326	+	fimH	b4320	0.55	+0.3
4,547,361	+	fimH	b4320	0.59	-0.3
4,547,361	+	fimH	b4320	0.59	-0.1
4,547,361	+	fimH	b4320	0.59	-0.4
4,547,361	+	fimH	b4320	0.59	+1.1
4,547,363	+	fimH	b4320	0.59	+0.2
4,547,367	-	fimH	b4320	0.59	+0.1
4,547,367	-	fimH	b4320	0.59	-0.5
4,547,369	-	fimH	b4320	0.60	-0.8
4,547,369	-	fimH	b4320	0.60	+0.1
4,547,369	-	fimH	b4320	0.60	-0.2
4,547,387	+	fimH	b4320	0.62	+0.4
4,547,387	+	fimH	b4320	0.62	+1.0
4,547,407	+	fimH	b4320	0.64	-0.4
4,547,407	+	fimH	b4320	0.64	+0.5
4,547,417	+	fimH	b4320	0.65	+0.4
4,547,417	+	fimH	b4320	0.65	-0.2
4,547,417	+	fimH	b4320	0.65	+0.2
4,547,425	-	fimH	b4320	0.66	-0.5
4,547,481	-	fimH	b4320	0.72	-0.1
4,547,483	-	fimH	b4320	0.72	+0.1
4,547,490	-	fimH	b4320	0.73	+0.2
4,547,490	-	fimH	b4320	0.73	+0.5
4,547,542	+	fimH	b4320	0.79	+0.2
4,547,542	+	fimH	b4320	0.79	-0.1
4,547,558	-	fimH	b4320	0.81	+0.6
4,547,565	+	fimH	b4320	0.81	-0.4
4,547,647	-				-0.1
4,547,647	-				+0.5
4,547,666	+				+0.3
4,547,747	-				+1.1
4,547,763	+				-1.3
4,547,766	+				+0.3
4,547,766	-				-0.2
4,547,768	+				-0.1