Strain Fitness in Escherichia coli BW25113 around b2414

Experiment: Ying_sugar7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 3
2,529,552	+				-2.3
2,529,552	+				-0.6
2,529,633	+	cysZ	b2413	0.19	-0.1
2,529,634	+	cysZ	b2413	0.20	+0.7
2,529,634	+	cysZ	b2413	0.20	+0.4
2,529,641	-	cysZ	b2413	0.20	+0.3
2,529,664	+	cysZ	b2413	0.23	-0.5
2,529,666	-	cysZ	b2413	0.24	-0.4
2,529,672	+	cysZ	b2413	0.25	+0.3
2,529,687	+	cysZ	b2413	0.27	+0.8
2,529,717	-	cysZ	b2413	0.30	+0.7
2,529,717	-	cysZ	b2413	0.30	+0.3
2,529,729	+	cysZ	b2413	0.32	-0.2
2,529,790	+	cysZ	b2413	0.40	+0.3
2,529,798	+	cysZ	b2413	0.41	-0.3
2,529,807	-	cysZ	b2413	0.42	-0.5
2,529,918	+	cysZ	b2413	0.57	+0.2
2,529,927	-	cysZ	b2413	0.58	+0.4
2,529,984	+	cysZ	b2413	0.65	-0.1
2,529,997	-	cysZ	b2413	0.67	-0.9
2,530,023	-	cysZ	b2413	0.71	-1.0
2,530,028	-	cysZ	b2413	0.71	+0.3
2,530,046	+	cysZ	b2413	0.74	+0.4
2,530,080	+	cysZ	b2413	0.78	+0.3
2,530,080	+	cysZ	b2413	0.78	-0.3
2,530,124	+	cysZ	b2413	0.84	+0.2
2,530,124	+	cysZ	b2413	0.84	+0.0
2,530,339	+				+0.4
2,530,339	+				+0.3
2,530,347	-				-0.1
2,530,347	-				+0.2
2,530,390	-				-4.7
2,530,404	-				-4.4
2,530,417	+				-3.5
2,530,417	+				-1.0
2,530,417	+				-0.6
2,530,417	+				-2.5
2,530,425	-				-5.4
2,530,425	-				-5.2
2,530,435	-				-3.5
2,530,487	+				-5.2
2,530,487	+				-3.7
2,530,532	-	cysK	b2414	0.10	-6.2
2,530,551	+	cysK	b2414	0.12	-4.5
2,530,551	+	cysK	b2414	0.12	-3.9
2,530,564	-	cysK	b2414	0.14	-7.0
2,530,656	+	cysK	b2414	0.23	-4.4
2,530,659	-	cysK	b2414	0.23	-4.6
2,530,707	+	cysK	b2414	0.28	-4.3
2,530,720	+	cysK	b2414	0.30	-7.3
2,530,720	+	cysK	b2414	0.30	-5.5
2,530,720	+	cysK	b2414	0.30	-3.0
2,530,742	+	cysK	b2414	0.32	-6.2
2,530,777	+	cysK	b2414	0.36	-5.7
2,530,793	-	cysK	b2414	0.37	-5.0
2,530,829	-	cysK	b2414	0.41	-4.3
2,530,912	+	cysK	b2414	0.49	-3.2
2,531,003	+	cysK	b2414	0.59	-6.9
2,531,003	+	cysK	b2414	0.59	-4.9
2,531,040	+	cysK	b2414	0.63	-5.3
2,531,050	+	cysK	b2414	0.64	-5.9
2,531,050	+	cysK	b2414	0.64	-3.7
2,531,138	+	cysK	b2414	0.73	-5.4
2,531,138	+	cysK	b2414	0.73	-5.3
2,531,169	-	cysK	b2414	0.76	-4.7
2,531,314	-				-5.4
2,531,455	+				+0.8
2,531,455	+				+0.7
2,531,478	+				-2.8
2,531,478	+				+0.5
2,531,484	+				+0.2
2,531,666	+				+0.1
2,531,666	+				-0.1
2,531,725	+				-1.0
2,531,725	+				+0.6