Strain Fitness in Escherichia coli BW25113 around b2297
Experiment: Ying_sugar7 rep B; time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_sugar7 rep B; time point 3 |
---|---|---|---|---|---|
remove | |||||
2,414,132 | - | pta | b2297 | 0.64 | +1.1 |
2,415,137 | - | +0.3 | |||
2,415,230 | + | +0.7 | |||
2,415,230 | + | +0.1 | |||
2,415,251 | - | +0.1 | |||
2,415,285 | - | yfcC | b2298 | 0.12 | +0.4 |
2,415,285 | - | yfcC | b2298 | 0.12 | +0.9 |
2,415,345 | + | yfcC | b2298 | 0.16 | +0.5 |
2,415,658 | + | yfcC | b2298 | 0.36 | -0.0 |
2,415,679 | + | yfcC | b2298 | 0.38 | +0.6 |
2,415,679 | + | yfcC | b2298 | 0.38 | -0.6 |
2,415,692 | + | yfcC | b2298 | 0.39 | +0.2 |
2,415,812 | - | yfcC | b2298 | 0.47 | -0.5 |
2,415,835 | + | yfcC | b2298 | 0.48 | -0.3 |
2,415,846 | + | yfcC | b2298 | 0.49 | +0.0 |
2,415,847 | + | yfcC | b2298 | 0.49 | +0.3 |
2,415,860 | - | yfcC | b2298 | 0.50 | +0.1 |
2,415,860 | - | yfcC | b2298 | 0.50 | -0.1 |
2,415,891 | + | yfcC | b2298 | 0.52 | -0.4 |
Or see this region's nucleotide sequence