Strain Fitness in Escherichia coli BW25113 around b1710
Experiment: Ying_sugar7 rep B; time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_sugar7 rep B; time point 3 |
---|---|---|---|---|---|
remove | |||||
1,791,016 | + | btuD | b1709 | 0.24 | +0.8 |
1,791,494 | - | btuD | b1709 | 0.88 | -1.0 |
1,791,821 | - | btuE | b1710 | 0.43 | +0.2 |
1,791,821 | - | btuE | b1710 | 0.43 | +0.1 |
1,791,931 | - | btuE | b1710 | 0.63 | +0.0 |
1,792,288 | - | -0.4 | |||
1,792,295 | + | btuC | b1711 | 0.10 | -0.9 |
1,792,295 | + | btuC | b1711 | 0.10 | -0.7 |
1,792,423 | - | btuC | b1711 | 0.23 | -0.1 |
1,792,432 | + | btuC | b1711 | 0.24 | +0.8 |
1,792,492 | + | btuC | b1711 | 0.30 | -0.0 |
1,792,566 | + | btuC | b1711 | 0.38 | -0.1 |
1,792,592 | - | btuC | b1711 | 0.40 | -0.9 |
1,792,783 | + | btuC | b1711 | 0.60 | +0.1 |
1,792,820 | - | btuC | b1711 | 0.64 | -0.5 |
1,792,846 | + | btuC | b1711 | 0.66 | -0.5 |
1,792,980 | + | btuC | b1711 | 0.80 | +0.1 |
1,793,064 | + | btuC | b1711 | 0.88 | -0.6 |
1,793,108 | + | -1.2 |
Or see this region's nucleotide sequence