Strain Fitness in Escherichia coli BW25113 around b0763

Experiment: Ying_sugar7 rep B; time point 3

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntmodE and ybhT are separated by 128 nucleotidesybhT and modA are separated by 166 nucleotidesmodA and modB overlap by 1 nucleotidesmodB and modC are separated by 2 nucleotides b0761: modE - DNA-binding transcriptional dual regulator (NCBI), at 793,079 to 793,867 modE b0762: ybhT - hypothetical protein (NCBI), at 793,996 to 794,145 ybhT b0763: modA - molybdate transporter subunit (NCBI), at 794,312 to 795,085 modA b0764: modB - molybdate ABC transporter permease protein (NCBI), at 795,085 to 795,774 modB b0765: modC - molybdate transporter subunit (NCBI), at 795,777 to 796,835 modC Position (kb) 794 795 796Strain fitness (log2 ratio) -1 0 1 2 3at 793.538 kb on - strand, within modEat 793.538 kb on - strand, within modEat 793.629 kb on - strand, within modEat 793.629 kb on - strand, within modEat 793.631 kb on + strand, within modEat 793.631 kb on + strand, within modEat 793.636 kb on + strand, within modEat 793.639 kb on - strand, within modEat 793.639 kb on - strand, within modEat 793.639 kb on - strand, within modEat 793.683 kb on - strand, within modEat 793.683 kb on - strand, within modEat 793.685 kb on + strand, within modEat 793.735 kb on + strand, within modEat 793.735 kb on + strand, within modEat 793.837 kb on + strandat 793.847 kb on - strandat 793.864 kb on + strandat 793.864 kb on + strandat 793.872 kb on - strandat 793.872 kb on - strandat 793.942 kb on + strandat 793.942 kb on + strandat 794.427 kb on + strand, within modAat 794.450 kb on - strand, within modAat 794.521 kb on - strand, within modAat 794.527 kb on + strand, within modAat 794.606 kb on + strand, within modAat 794.606 kb on + strand, within modAat 794.628 kb on + strand, within modAat 794.800 kb on + strand, within modAat 794.876 kb on + strand, within modAat 794.989 kb on - strand, within modAat 795.088 kb on + strandat 795.113 kb on - strandat 795.153 kb on + strandat 795.230 kb on + strand, within modBat 795.330 kb on - strand, within modBat 795.549 kb on + strand, within modBat 795.549 kb on + strandat 795.552 kb on - strand, within modBat 795.638 kb on + strand, within modBat 795.638 kb on + strand, within modBat 795.642 kb on - strand, within modBat 795.644 kb on + strand, within modBat 795.646 kb on - strand, within modBat 795.695 kb on - strand, within modBat 795.811 kb on + strandat 795.811 kb on + strandat 795.820 kb on - strandat 795.820 kb on - strandat 796.082 kb on + strand, within modCat 796.082 kb on + strand, within modC

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Per-strain Table

Position Strand Gene LocusTag Fraction Ying_sugar7 rep B; time point 3
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793,538 - modE b0761 0.58 +1.3
793,538 - modE b0761 0.58 +0.8
793,629 - modE b0761 0.70 +0.1
793,629 - modE b0761 0.70 -0.4
793,631 + modE b0761 0.70 -0.7
793,631 + modE b0761 0.70 -1.0
793,636 + modE b0761 0.71 -0.3
793,639 - modE b0761 0.71 +0.3
793,639 - modE b0761 0.71 +0.5
793,639 - modE b0761 0.71 +0.3
793,683 - modE b0761 0.77 +2.8
793,683 - modE b0761 0.77 +0.2
793,685 + modE b0761 0.77 +0.2
793,735 + modE b0761 0.83 +0.5
793,735 + modE b0761 0.83 +2.9
793,837 + +0.0
793,847 - +0.4
793,864 + +0.1
793,864 + -0.7
793,872 - -0.2
793,872 - -0.2
793,942 + +0.5
793,942 + -0.0
794,427 + modA b0763 0.15 -0.2
794,450 - modA b0763 0.18 +0.2
794,521 - modA b0763 0.27 +0.0
794,527 + modA b0763 0.28 +0.7
794,606 + modA b0763 0.38 -1.1
794,606 + modA b0763 0.38 +0.1
794,628 + modA b0763 0.41 -0.4
794,800 + modA b0763 0.63 -0.2
794,876 + modA b0763 0.73 -0.3
794,989 - modA b0763 0.87 -0.4
795,088 + +0.8
795,113 - +0.6
795,153 + -0.7
795,230 + modB b0764 0.21 -0.2
795,330 - modB b0764 0.36 -0.5
795,549 + modB b0764 0.67 -0.8
795,549 + +1.4
795,552 - modB b0764 0.68 -0.1
795,638 + modB b0764 0.80 -0.0
795,638 + modB b0764 0.80 -0.7
795,642 - modB b0764 0.81 -0.5
795,644 + modB b0764 0.81 +0.2
795,646 - modB b0764 0.81 -0.6
795,695 - modB b0764 0.88 -0.3
795,811 + -0.2
795,811 + -1.2
795,820 - -0.3
795,820 - +0.9
796,082 + modC b0765 0.29 -0.1
796,082 + modC b0765 0.29 -0.1

Or see this region's nucleotide sequence