Strain Fitness in Escherichia coli BW25113 around b0997

Experiment: Ying_sugar7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 3
1,057,487	+	torC	b0996	0.15	-0.2
1,057,487	+	torC	b0996	0.15	+0.1
1,057,562	+	torC	b0996	0.22	-0.2
1,057,562	+	torC	b0996	0.22	-0.2
1,057,765	+	torC	b0996	0.39	-0.4
1,057,980	+	torC	b0996	0.57	-0.4
1,057,988	-	torC	b0996	0.58	-0.3
1,057,988	-	torC	b0996	0.58	-0.1
1,058,141	-	torC	b0996	0.71	-0.6
1,058,187	-	torC	b0996	0.75	+0.1
1,058,259	+	torC	b0996	0.81	-0.3
1,058,294	+	torC	b0996	0.84	-0.6
1,058,453	-				-0.4
1,058,453	-				+0.1
1,058,656	+				+0.2
1,058,889	+	torA	b0997	0.16	+0.3
1,058,907	-	torA	b0997	0.17	-0.1
1,058,976	+	torA	b0997	0.20	+0.2
1,058,976	+	torA	b0997	0.20	+0.8
1,058,984	-	torA	b0997	0.20	+0.0
1,059,020	+	torA	b0997	0.21	+0.2
1,059,020	+	torA	b0997	0.21	+0.2
1,059,048	+	torA	b0997	0.22	-0.2
1,059,048	+	torA	b0997	0.22	+0.5
1,059,109	-	torA	b0997	0.25	-0.1
1,059,314	-	torA	b0997	0.33	-0.8
1,059,336	-	torA	b0997	0.34	-0.2
1,059,336	-	torA	b0997	0.34	+0.1
1,059,388	+	torA	b0997	0.36	-0.2
1,059,601	+	torA	b0997	0.44	+0.2
1,059,625	-	torA	b0997	0.45	-0.9
1,059,637	-	torA	b0997	0.45	-0.3
1,059,637	-	torA	b0997	0.45	-0.4
1,059,706	+	torA	b0997	0.48	-0.6
1,059,706	+	torA	b0997	0.48	-0.5
1,059,784	+	torA	b0997	0.51	+0.3
1,059,826	-	torA	b0997	0.53	-0.2
1,060,001	+	torA	b0997	0.60	-0.2
1,060,001	+	torA	b0997	0.60	-0.7
1,060,234	-	torA	b0997	0.69	-0.1
1,060,234	-	torA	b0997	0.69	-2.3
1,060,302	-	torA	b0997	0.72	+0.1
1,060,302	-	torA	b0997	0.72	+0.2
1,060,512	+	torA	b0997	0.80	+0.0
1,060,744	-	torA	b0997	0.89	-0.3
1,060,754	+	torA	b0997	0.89	+0.5
1,060,754	+	torA	b0997	0.89	-0.6
1,060,803	+				-0.6
1,060,826	-				-0.1
1,060,826	-				+0.3
1,060,847	-				+0.3
1,060,940	+				-0.1
1,060,989	+				-0.2
1,061,073	+				-0.1
1,061,083	-	torD	b0998	0.10	-0.4
1,061,747	-				+0.0
1,061,789	-				-0.3
1,061,879	-	cbpM	b0999	0.35	-0.3
1,061,889	-	cbpM	b0999	0.38	-0.1
1,061,978	-	cbpM	b0999	0.67	-1.6
1,061,978	-	cbpM	b0999	0.67	-1.1