Strain Fitness in Escherichia coli BW25113 around b0114
Experiment: Ying_sugar7 rep A; time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_sugar7 rep A; time point 3 |
---|---|---|---|---|---|
remove | |||||
122,355 | + | pdhR | b0113 | 0.34 | -4.0 |
122,358 | + | pdhR | b0113 | 0.35 | -4.9 |
122,369 | + | pdhR | b0113 | 0.36 | -2.5 |
122,416 | + | pdhR | b0113 | 0.42 | -4.0 |
122,442 | + | pdhR | b0113 | 0.46 | -4.7 |
122,471 | + | pdhR | b0113 | 0.50 | -5.1 |
122,489 | + | pdhR | b0113 | 0.52 | -3.6 |
122,489 | + | pdhR | b0113 | 0.52 | -3.2 |
122,489 | + | pdhR | b0113 | 0.52 | -1.9 |
122,500 | + | pdhR | b0113 | 0.53 | -1.9 |
122,537 | + | pdhR | b0113 | 0.58 | -4.3 |
122,814 | + | -3.5 | |||
123,002 | + | +1.0 | |||
124,820 | + | aceE | b0114 | 0.68 | -0.1 |
124,849 | + | aceE | b0114 | 0.69 | +0.1 |
125,049 | - | aceE | b0114 | 0.76 | -0.6 |
125,327 | - | aceE | b0114 | 0.87 | -0.6 |
Or see this region's nucleotide sequence