Strain Fitness in Escherichia coli BW25113 around b4441

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
2,688,321	-	yfhK	b2556	0.44	-0.3
2,688,421	+	yfhK	b2556	0.51	-0.1
2,688,467	+	yfhK	b2556	0.54	+0.3
2,688,526	+	yfhK	b2556	0.58	+0.6
2,688,526	+	yfhK	b2556	0.58	+0.1
2,688,566	+	yfhK	b2556	0.61	-1.9
2,688,652	+	yfhK	b2556	0.67	+0.4
2,688,674	-	yfhK	b2556	0.69	-1.0
2,688,707	-	yfhK	b2556	0.71	+0.2
2,688,732	-	yfhK	b2556	0.73	+0.0
2,688,874	+	yfhK	b2556	0.83	-2.4
2,688,874	+	yfhK	b2556	0.83	+0.2
2,688,908	+	yfhK	b2556	0.85	-0.0
2,688,912	+	yfhK	b2556	0.85	+0.2
2,688,914	-	yfhK	b2556	0.86	-0.3
2,688,914	-	yfhK	b2556	0.86	+0.7
2,688,969	+	yfhK	b2556	0.89	+0.4
2,689,027	+				+0.2
2,689,030	-				+0.3
2,689,155	-				-0.7
2,689,169	+				-0.4
2,689,250	+	glmY	b4441	0.39	-0.6
2,689,677	-				+0.6
2,689,716	+				-4.0
2,689,716	+				-2.9
2,689,716	+				-5.0
2,689,724	-				-4.7
2,689,838	-				-5.0
2,689,838	-				-6.2
2,689,891	+				-3.4
2,689,959	+				-6.0
2,690,045	+				-6.3
2,690,136	+	purL	b2557	0.12	-2.8
2,690,136	+	purL	b2557	0.12	-3.7
2,690,199	-	purL	b2557	0.13	-3.8
2,690,199	-	purL	b2557	0.13	-3.0
2,690,209	+	purL	b2557	0.14	-5.9
2,690,294	+	purL	b2557	0.16	-4.3
2,690,299	+	purL	b2557	0.16	-3.0
2,690,308	-	purL	b2557	0.16	-3.9
2,690,356	-	purL	b2557	0.17	-2.8