Strain Fitness in Escherichia coli BW25113 around b4570
Experiment: Ying_OrganicAcid7 rep C; time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_OrganicAcid7 rep C; time point 3 |
---|---|---|---|---|---|
remove | |||||
1,424,506 | - | +1.0 | |||
1,424,506 | - | +1.2 | |||
1,424,514 | - | +3.2 | |||
1,424,628 | + | ynaA | b1368 | 0.16 | +2.5 |
1,424,677 | + | ynaA | b1368 | 0.21 | +2.2 |
1,424,862 | - | ynaA | b1368 | 0.41 | +1.3 |
1,424,862 | - | ynaA | b1368 | 0.41 | -1.9 |
1,424,869 | - | ynaA | b1368 | 0.42 | -1.6 |
1,425,045 | + | ynaA | b1368 | 0.61 | +0.6 |
1,425,045 | + | ynaA | b1368 | 0.61 | +3.2 |
1,425,060 | + | ynaA | b1368 | 0.62 | +0.2 |
1,425,178 | + | ynaA | b1368 | 0.75 | -0.4 |
1,425,321 | - | +1.0 | |||
1,425,377 | - | +0.5 | |||
1,425,377 | - | +0.5 | |||
1,425,496 | + | lomR | b4570 | 0.40 | +0.7 |
1,425,548 | + | lomR | b4570 | 0.64 | +0.4 |
1,425,574 | - | lomR | b4570 | 0.77 | +0.8 |
1,426,405 | + | insH-5 | b1370 | 0.65 | +0.5 |
1,426,456 | - | insH-5 | b1370 | 0.70 | -1.1 |
Or see this region's nucleotide sequence