Strain Fitness in Escherichia coli BW25113 around b1231

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
1,286,125	+				+0.9
1,286,316	-				+1.2
1,286,316	-				+1.3
1,286,690	-				+0.2
1,286,690	-				+0.1
1,286,805	+	tyrT	b1231	0.52	-0.6
1,286,916	+				-1.9
1,287,056	+				-3.6
1,287,064	+				-3.7
1,287,233	+	purU	b1232	0.27	-4.1
1,287,255	-	purU	b1232	0.30	-2.1
1,287,255	-	purU	b1232	0.30	-4.2
1,287,342	+	purU	b1232	0.40	-2.0
1,287,375	+	purU	b1232	0.44	-1.7
1,287,423	-	purU	b1232	0.50	-0.6
1,287,425	+	purU	b1232	0.50	-3.5
1,287,439	+	purU	b1232	0.51	-3.7
1,287,448	+	purU	b1232	0.53	-3.9
1,287,473	-	purU	b1232	0.56	-5.2
1,287,491	+	purU	b1232	0.58	-4.5
1,287,647	-	purU	b1232	0.76	-5.5
1,287,691	-	purU	b1232	0.81	-3.1
1,287,714	+	purU	b1232	0.84	-4.7
1,287,801	-				-3.9
1,287,801	-				-3.9
1,287,837	+				-1.5