Strain Fitness in Escherichia coli BW25113 around b4152

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
4,376,400	-	ampC	b4150	0.50	-0.6
4,376,427	+	ampC	b4150	0.52	-0.4
4,376,427	+	ampC	b4150	0.52	+1.6
4,376,484	+				+3.9
4,376,493	+	ampC	b4150	0.58	-0.7
4,376,541	+	ampC	b4150	0.62	-0.0
4,376,541	+	ampC	b4150	0.62	+0.2
4,376,581	+	ampC	b4150	0.66	+0.2
4,376,594	+	ampC	b4150	0.67	-0.3
4,376,596	+	ampC	b4150	0.67	-0.1
4,376,634	+	ampC	b4150	0.71	+0.1
4,376,642	-	ampC	b4150	0.71	-0.0
4,376,690	-	ampC	b4150	0.75	-0.3
4,376,690	-	ampC	b4150	0.75	+0.4
4,376,693	-	ampC	b4150	0.76	+0.2
4,376,794	+	ampC	b4150	0.85	+0.3
4,376,794	+	ampC	b4150	0.85	+0.0
4,376,800	+	ampC	b4150	0.85	-0.7
4,376,982	+				+0.9
4,377,019	-				+0.0
4,377,043	+				+0.5
4,377,043	+				+0.6
4,377,078	-	frdD	b4151	0.13	+1.2
4,377,078	-	frdD	b4151	0.13	-0.6
4,377,126	+	frdD	b4151	0.27	+2.3
4,377,126	+	frdD	b4151	0.27	+0.3
4,377,155	-	frdD	b4151	0.35	+0.2
4,377,155	-	frdD	b4151	0.35	+0.2
4,377,320	+	frdD	b4151	0.81	-0.5
4,377,320	+	frdD	b4151	0.81	+0.4
4,377,401	+				-1.1
4,377,401	+				-2.5
4,377,401	+				+0.5
4,377,404	-				-1.1
4,377,404	-				-1.8
4,377,406	-				+0.0
4,377,409	-				+0.4
4,377,409	-				+0.4
4,377,409	-				-0.4
4,377,446	-	frdC	b4152	0.12	+0.5
4,377,446	-	frdC	b4152	0.12	+0.3
4,377,550	+	frdC	b4152	0.38	-0.4
4,377,576	+	frdC	b4152	0.44	+1.0
4,377,777	+				-0.1
4,377,794	+				-0.1
4,377,794	+				+0.8
4,377,812	-				-0.0
4,377,812	-				-0.4
4,377,812	-				+0.8
4,377,889	+	frdB	b4153	0.11	+0.6
4,377,889	-	frdB	b4153	0.11	+0.4
4,377,909	-	frdB	b4153	0.14	+0.5
4,377,909	-	frdB	b4153	0.14	-0.0
4,377,919	+	frdB	b4153	0.15	+0.1
4,377,939	-	frdB	b4153	0.18	+0.4
4,377,966	-	frdB	b4153	0.22	+0.5
4,377,972	+	frdB	b4153	0.23	+0.8
4,377,976	+	frdB	b4153	0.23	+0.1
4,377,980	-	frdB	b4153	0.24	-0.9
4,377,990	-	frdB	b4153	0.25	-0.9
4,378,039	+	frdB	b4153	0.32	-0.3
4,378,039	+	frdB	b4153	0.32	-0.6
4,378,079	-	frdB	b4153	0.37	+0.3
4,378,079	-	frdB	b4153	0.37	-0.3
4,378,106	-	frdB	b4153	0.41	-0.5
4,378,134	+	frdB	b4153	0.45	+0.9
4,378,134	+	frdB	b4153	0.45	-0.1
4,378,161	+	frdB	b4153	0.48	-0.2
4,378,261	-	frdB	b4153	0.62	-0.3
4,378,265	-	frdB	b4153	0.62	+1.1
4,378,272	+	frdB	b4153	0.63	+0.4
4,378,272	+	frdB	b4153	0.63	+0.7
4,378,301	+	frdB	b4153	0.67	+1.1
4,378,393	+	frdB	b4153	0.80	-0.0
4,378,403	+	frdB	b4153	0.81	+0.2
4,378,427	-	frdB	b4153	0.84	+0.2
4,378,453	-	frdB	b4153	0.88	-1.1
4,378,454	-	frdB	b4153	0.88	-0.7
4,378,475	-				-1.0
4,378,475	-				+1.1
4,378,646	+				-1.1
4,378,646	+				+0.6
4,378,665	-				+0.5
4,378,699	-				-0.7
4,378,699	-				-0.3
4,378,720	+	frdA	b4154	0.10	+0.7
4,378,726	+	frdA	b4154	0.11	+0.5
4,378,726	+	frdA	b4154	0.11	-1.5
4,378,740	+	frdA	b4154	0.11	-0.0
4,378,758	-	frdA	b4154	0.12	+0.3
4,378,768	-	frdA	b4154	0.13	+1.3
4,378,768	-	frdA	b4154	0.13	+0.0
4,378,777	-	frdA	b4154	0.13	+0.2
4,378,777	-	frdA	b4154	0.13	-0.2
4,378,789	-	frdA	b4154	0.14	+0.4
4,378,789	-	frdA	b4154	0.14	-0.2