Strain Fitness in Escherichia coli BW25113 around b3686

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
3,863,517	-	yidE	b3685	0.53	-1.3
3,863,522	-	yidE	b3685	0.53	-0.3
3,863,523	-	yidE	b3685	0.53	-0.6
3,863,545	+	yidE	b3685	0.55	-1.9
3,863,583	+	yidE	b3685	0.57	+0.6
3,863,583	+	yidE	b3685	0.57	-0.3
3,863,589	-	yidE	b3685	0.57	+0.8
3,863,636	+	yidE	b3685	0.60	+0.4
3,863,636	+	yidE	b3685	0.60	+0.6
3,863,651	+	yidE	b3685	0.61	+0.2
3,863,651	+	yidE	b3685	0.61	+1.0
3,863,659	-	yidE	b3685	0.62	-4.0
3,863,712	-	yidE	b3685	0.65	-0.6
3,863,721	+	yidE	b3685	0.65	+0.7
3,863,774	-	yidE	b3685	0.69	+0.1
3,863,774	-	yidE	b3685	0.69	-0.7
3,863,776	+	yidE	b3685	0.69	+0.1
3,863,815	+	yidE	b3685	0.71	-0.2
3,863,815	+	yidE	b3685	0.71	+0.1
3,863,832	-	yidE	b3685	0.72	+0.1
3,863,832	-	yidE	b3685	0.72	-0.3
3,863,859	-	yidE	b3685	0.74	+0.0
3,863,859	-	yidE	b3685	0.74	+0.2
3,863,894	-				+1.4
3,863,899	+	yidE	b3685	0.76	+1.3
3,863,899	+	yidE	b3685	0.76	+0.5
3,863,909	-	yidE	b3685	0.77	-0.7
3,863,955	+	yidE	b3685	0.79	-0.3
3,864,007	+	yidE	b3685	0.83	+0.1
3,864,007	+	yidE	b3685	0.83	-0.5
3,864,007	+	yidE	b3685	0.83	+0.3
3,864,039	+	yidE	b3685	0.84	-0.1
3,864,053	-	yidE	b3685	0.85	+0.2
3,864,059	+	yidE	b3685	0.86	-0.0
3,864,087	-	yidE	b3685	0.87	+0.0
3,864,130	-				+1.0
3,864,140	-				+1.0
3,864,140	-				-0.1
3,864,170	+				-1.3
3,864,186	-				+1.4
3,864,186	-				-1.3
3,864,201	+				-0.0
3,864,214	-				+1.2
3,864,214	-				+0.4
3,864,239	+				+0.6
3,864,239	+				+0.1
3,864,269	-				-0.2
3,864,275	+				+0.3
3,864,283	-				+0.1
3,864,284	+				+0.3
3,864,289	-				-0.4
3,864,292	-				-1.9
3,864,292	-				+0.6
3,864,295	+				+0.3
3,864,376	+				-0.0
3,864,433	+				-0.6
3,864,488	-				+0.8
3,864,488	-				-0.9
3,864,510	+				-0.3
3,864,545	+	ibpB	b3686	0.12	+0.2
3,864,569	-	ibpB	b3686	0.18	+0.3
3,864,583	-	ibpB	b3686	0.21	+0.4
3,864,626	+	ibpB	b3686	0.31	+0.4
3,864,719	+	ibpB	b3686	0.53	-0.4
3,864,719	+	ibpB	b3686	0.53	-0.4
3,864,727	-	ibpB	b3686	0.55	-0.5
3,864,727	-	ibpB	b3686	0.55	-1.2
3,864,733	+	ibpB	b3686	0.56	+0.8
3,864,778	-	ibpB	b3686	0.67	-0.1
3,864,778	-	ibpB	b3686	0.67	+0.6
3,864,778	-	ibpB	b3686	0.67	+0.8
3,864,789	-	ibpB	b3686	0.69	+0.7
3,864,812	-	ibpB	b3686	0.75	+6.2
3,864,856	+	ibpB	b3686	0.85	-0.0
3,864,864	-	ibpB	b3686	0.87	+0.1
3,864,866	+	ibpB	b3686	0.87	+0.0
3,864,870	+	ibpB	b3686	0.88	+0.6
3,865,029	-				-0.2
3,865,029	-				-0.4
3,865,029	-				-0.3
3,865,090	+	ibpA	b3687	0.14	-0.4
3,865,090	+	ibpA	b3687	0.14	+0.0
3,865,090	+	ibpA	b3687	0.14	-0.2
3,865,090	+	ibpA	b3687	0.14	+0.8
3,865,090	+	ibpA	b3687	0.14	+0.8
3,865,098	-	ibpA	b3687	0.16	+0.1
3,865,098	-	ibpA	b3687	0.16	+0.1
3,865,098	-	ibpA	b3687	0.16	-0.0
3,865,112	+	ibpA	b3687	0.19	-0.0
3,865,113	-	ibpA	b3687	0.20	-0.3
3,865,120	-	ibpA	b3687	0.21	-1.1
3,865,120	-	ibpA	b3687	0.21	+0.4
3,865,120	-	ibpA	b3687	0.21	-0.1
3,865,180	+	ibpA	b3687	0.36	+0.1
3,865,182	-	ibpA	b3687	0.36	+0.4
3,865,184	+	ibpA	b3687	0.37	+0.5
3,865,210	-	ibpA	b3687	0.43	-0.5
3,865,217	+	ibpA	b3687	0.45	+0.3
3,865,233	-	ibpA	b3687	0.49	-0.6
3,865,233	-	ibpA	b3687	0.49	+0.3
3,865,240	+	ibpA	b3687	0.50	-0.5
3,865,241	+	ibpA	b3687	0.50	-0.4
3,865,244	-	ibpA	b3687	0.51	+0.1
3,865,244	-	ibpA	b3687	0.51	+0.5
3,865,253	+	ibpA	b3687	0.53	+0.4
3,865,253	-	ibpA	b3687	0.53	-0.2
3,865,325	+	ibpA	b3687	0.71	-0.7
3,865,325	+	ibpA	b3687	0.71	+0.2
3,865,330	+	ibpA	b3687	0.72	-0.5
3,865,332	+	ibpA	b3687	0.72	-0.4
3,865,332	+	ibpA	b3687	0.72	-0.7
3,865,382	+	ibpA	b3687	0.85	-0.1
3,865,389	-	ibpA	b3687	0.86	+0.2
3,865,424	-				+0.4
3,865,428	-				+0.3
3,865,481	-				-0.2
3,865,481	-				-0.6
3,865,505	+				+0.3
3,865,613	+				-0.2
3,865,613	+				+0.5
3,865,615	+				+0.1
3,865,621	-				+0.1
3,865,630	-				-0.4
3,865,637	-				+0.1
3,865,637	-				-1.1
3,865,674	-				-0.5
3,865,711	-				+0.0
3,865,713	+				+0.2
3,865,713	-				+0.3
3,865,757	+				-0.3
3,865,763	+				-0.0
3,865,791	+	yidQ	b3688	0.12	+0.0
3,865,799	-	yidQ	b3688	0.14	-0.8
3,865,813	+	yidQ	b3688	0.19	-0.1
3,865,813	+	yidQ	b3688	0.19	-0.6
3,865,821	-	yidQ	b3688	0.21	+0.8
3,865,821	-	yidQ	b3688	0.21	-0.2
3,865,825	+	yidQ	b3688	0.22	-0.3
3,865,833	-	yidQ	b3688	0.25	+0.3