Strain Fitness in Escherichia coli BW25113 around b2482

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
2,598,938	+				-0.3
2,598,967	-				+0.3
2,598,976	-				+0.3
2,599,005	+				+0.1
2,599,230	+				+0.4
2,599,238	-				-0.6
2,599,319	-	hyfA	b2481	0.16	+0.2
2,599,319	-	hyfA	b2481	0.16	+0.6
2,599,362	+	hyfA	b2481	0.22	+0.2
2,599,370	-	hyfA	b2481	0.24	-0.2
2,599,426	+	hyfA	b2481	0.33	+0.4
2,599,488	-	hyfA	b2481	0.43	-0.0
2,599,528	-	hyfA	b2481	0.49	-0.8
2,599,913	-				+0.4
2,599,998	+				+0.2
2,600,132	+	hyfB	b2482	0.14	+0.2
2,600,135	-	hyfB	b2482	0.15	-0.8
2,600,340	-	hyfB	b2482	0.25	-0.2
2,600,517	-	hyfB	b2482	0.34	+0.2
2,600,527	+	hyfB	b2482	0.34	-0.4
2,600,577	-	hyfB	b2482	0.37	+0.3
2,600,621	-	hyfB	b2482	0.39	-0.2
2,600,621	-	hyfB	b2482	0.39	-0.0
2,600,759	-	hyfB	b2482	0.46	+0.5
2,600,889	+	hyfB	b2482	0.52	+0.6
2,601,194	+	hyfB	b2482	0.67	+0.2
2,601,202	-	hyfB	b2482	0.67	-0.1
2,601,245	-	hyfB	b2482	0.70	+0.1
2,601,245	-	hyfB	b2482	0.70	-0.2
2,601,404	-	hyfB	b2482	0.77	+1.4
2,601,421	+	hyfB	b2482	0.78	-1.1
2,601,434	+	hyfB	b2482	0.79	+0.3
2,601,588	+	hyfB	b2482	0.87	-0.3
2,601,644	+	hyfB	b2482	0.89	+1.2
2,601,644	+	hyfB	b2482	0.89	+0.2
2,601,652	-	hyfB	b2482	0.90	+0.3
2,601,652	-	hyfB	b2482	0.90	+0.0
2,601,701	-				-2.6
2,601,701	-				+0.4
2,601,810	+				+0.3
2,601,925	+				+1.2
2,601,925	+				+0.4
2,601,988	-	hyfC	b2483	0.13	+0.0
2,602,127	+	hyfC	b2483	0.27	+0.0
2,602,127	+	hyfC	b2483	0.27	+0.9
2,602,150	-	hyfC	b2483	0.30	-0.0
2,602,199	-	hyfC	b2483	0.35	+0.3
2,602,199	-	hyfC	b2483	0.35	-0.6
2,602,325	+	hyfC	b2483	0.48	+0.6
2,602,350	+	hyfC	b2483	0.51	-0.2
2,602,379	+	hyfC	b2483	0.54	+0.7
2,602,382	-	hyfC	b2483	0.54	-0.5
2,602,432	-	hyfC	b2483	0.59	+0.8
2,602,620	-	hyfC	b2483	0.79	-0.9
2,602,620	-	hyfC	b2483	0.79	-0.2
2,602,813	+				+0.4
2,602,813	+				+0.6