Strain Fitness in Escherichia coli BW25113 around b1800

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
1,878,940	+				+1.4
1,879,004	-	yeaT	b1799	0.10	-0.4
1,879,009	+	yeaT	b1799	0.11	+0.8
1,879,027	-	yeaT	b1799	0.13	+0.6
1,879,118	-	yeaT	b1799	0.23	+0.2
1,879,175	-	yeaT	b1799	0.29	+0.4
1,879,175	-	yeaT	b1799	0.29	+0.1
1,879,210	-	yeaT	b1799	0.32	+0.2
1,879,210	-	yeaT	b1799	0.32	+0.5
1,879,231	-	yeaT	b1799	0.35	-0.5
1,879,245	+	yeaT	b1799	0.36	+1.6
1,879,253	-	yeaT	b1799	0.37	+1.5
1,879,266	+	yeaT	b1799	0.39	+1.1
1,879,340	-	yeaT	b1799	0.47	+0.4
1,879,340	-	yeaT	b1799	0.47	-2.0
1,879,410	+	yeaT	b1799	0.54	+1.4
1,879,426	+	yeaT	b1799	0.56	+0.4
1,879,601	-	yeaT	b1799	0.75	+0.4
1,880,044	+				+0.4
1,880,044	+				+0.0
1,880,069	-	yeaU	b1800	0.12	+0.1
1,880,172	+	yeaU	b1800	0.22	-0.5
1,880,172	+	yeaU	b1800	0.22	-1.0
1,880,373	+	yeaU	b1800	0.40	+0.7
1,880,488	+	yeaU	b1800	0.51	+0.0
1,880,488	+	yeaU	b1800	0.51	-0.7
1,880,489	-	yeaU	b1800	0.51	-1.4
1,880,516	+	yeaU	b1800	0.53	+0.5
1,880,524	-	yeaU	b1800	0.54	+1.1
1,880,535	+	yeaU	b1800	0.55	+0.4
1,880,628	-	yeaU	b1800	0.64	+0.4
1,880,642	+	yeaU	b1800	0.65	+0.0
1,880,706	+	yeaU	b1800	0.71	-0.8
1,880,787	-	yeaU	b1800	0.78	-0.2
1,880,846	+	yeaU	b1800	0.84	-0.2
1,880,881	+	yeaU	b1800	0.87	+0.1
1,880,881	+	yeaU	b1800	0.87	+0.1
1,880,890	+	yeaU	b1800	0.88	+0.2
1,880,904	-	yeaU	b1800	0.89	+0.4
1,880,929	-				-1.1
1,880,953	+				-0.2
1,880,956	+				+0.6
1,880,956	+				-0.8
1,880,977	-				+1.1
1,881,022	+				+0.1
1,881,053	+				-0.8
1,881,081	+				-0.6
1,881,172	+				+0.7
1,881,192	-				-0.3
1,881,206	-				+0.7
1,881,208	-				+0.9
1,881,243	-				+0.3
1,881,260	-				+0.3
1,881,298	-				-5.3
1,881,298	-				+0.4
1,881,303	-				+0.5
1,881,307	+				+2.6
1,881,307	+				-0.2
1,881,322	+				+2.4
1,881,322	+				+2.4
1,881,329	+				+0.5
1,881,474	-	yeaV	b1801	0.18	+0.4
1,881,494	-	yeaV	b1801	0.20	+0.4
1,881,494	-	yeaV	b1801	0.20	+1.0
1,881,513	-	yeaV	b1801	0.21	-0.5
1,881,715	-	yeaV	b1801	0.35	-0.1
1,882,003	+	yeaV	b1801	0.55	+0.3
1,882,003	+	yeaV	b1801	0.55	-0.0