Strain Fitness in Escherichia coli BW25113 around b1706

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
1,786,897	-	aroH	b1704	0.42	-0.5
1,787,055	-	aroH	b1704	0.57	-0.0
1,787,210	-	aroH	b1704	0.72	+0.1
1,787,217	-	aroH	b1704	0.72	+0.1
1,787,434	-				+1.0
1,788,003	+	ydiU	b1706	0.12	-0.3
1,788,003	+	ydiU	b1706	0.12	-1.1
1,788,058	-	ydiU	b1706	0.16	-1.2
1,788,058	-	ydiU	b1706	0.16	-0.3
1,788,158	-	ydiU	b1706	0.23	-1.0
1,788,163	-	ydiU	b1706	0.23	-0.1
1,788,163	-	ydiU	b1706	0.23	-0.0
1,788,521	-	ydiU	b1706	0.48	+0.4
1,788,521	-	ydiU	b1706	0.48	+0.3
1,788,760	+	ydiU	b1706	0.65	-1.0
1,788,775	-	ydiU	b1706	0.66	+0.5
1,788,775	-	ydiU	b1706	0.66	-0.5
1,788,841	+	ydiU	b1706	0.70	-1.9
1,788,938	+	ydiU	b1706	0.77	+0.3
1,788,961	-	ydiU	b1706	0.79	-0.2
1,789,181	+				-0.3
1,789,313	-				+0.3
1,789,313	-				+0.5
1,789,329	+				-1.3
1,789,329	+				+0.9
1,789,382	-				+0.3
1,789,385	+				+0.9
1,789,385	+				-0.5
1,789,393	-				+0.7
1,789,393	-				-1.0
1,789,395	-				-0.1
1,789,410	+	ydiV	b1707	0.11	+1.5
1,789,515	-	ydiV	b1707	0.26	-0.7
1,789,515	-	ydiV	b1707	0.26	+0.3
1,789,554	+	ydiV	b1707	0.31	+1.6
1,789,562	-	ydiV	b1707	0.32	+1.6
1,789,591	+	ydiV	b1707	0.36	-0.5
1,789,596	+	ydiV	b1707	0.37	-1.0
1,789,596	+	ydiV	b1707	0.37	+0.5
1,789,604	-	ydiV	b1707	0.38	+2.3
1,789,624	+	ydiV	b1707	0.41	-0.4
1,789,624	+	ydiV	b1707	0.41	+0.4
1,789,631	+	ydiV	b1707	0.42	-0.7
1,789,632	+	ydiV	b1707	0.42	+0.2
1,789,632	-	ydiV	b1707	0.42	+2.3
1,789,632	-	ydiV	b1707	0.42	+2.3
1,789,649	+	ydiV	b1707	0.45	+0.2
1,789,701	+	ydiV	b1707	0.52	+1.4
1,789,890	-	ydiV	b1707	0.78	+1.1
1,789,892	-	ydiV	b1707	0.79	+0.0
1,789,902	-	ydiV	b1707	0.80	-0.1
1,789,934	-	ydiV	b1707	0.84	+0.5
1,789,970	-	ydiV	b1707	0.89	-1.1
1,789,970	-	ydiV	b1707	0.89	-1.5
1,790,042	+				-0.7
1,790,105	-				+0.5
1,790,113	-				-0.6
1,790,113	-				-0.1
1,790,120	-				+0.5
1,790,130	+				+2.3