Strain Fitness in Escherichia coli BW25113 around b1423

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
1,492,510	+	ydcI	b1422	0.37	+2.2
1,492,510	+	ydcI	b1422	0.37	+1.9
1,492,540	+	ydcI	b1422	0.40	+1.5
1,492,602	+	ydcI	b1422	0.47	+2.3
1,492,771	+	ydcI	b1422	0.65	+2.3
1,492,857	-	ydcI	b1422	0.74	+2.6
1,492,857	-	ydcI	b1422	0.74	+2.0
1,492,914	-	ydcI	b1422	0.80	+2.7
1,492,953	-	ydcI	b1422	0.85	+1.5
1,492,970	-	ydcI	b1422	0.86	+2.6
1,492,970	-	ydcI	b1422	0.86	+2.8
1,493,290	-				+0.4
1,493,433	-				-0.4
1,493,545	-	ydcJ	b1423	0.17	-0.4
1,493,581	-	ydcJ	b1423	0.20	+0.9
1,493,704	-	ydcJ	b1423	0.29	+0.4
1,494,003	+	ydcJ	b1423	0.51	-0.0
1,494,636	-				-0.3
1,494,920	-				-0.0
1,494,927	+				-0.4
1,495,046	+	mdoD	b1424	0.10	-1.0
1,495,047	-	mdoD	b1424	0.10	+0.7
1,495,050	+	mdoD	b1424	0.10	-0.6
1,495,050	+	mdoD	b1424	0.10	+0.4
1,495,117	+	mdoD	b1424	0.14	-0.7
1,495,117	+	mdoD	b1424	0.14	-0.5
1,495,129	+	mdoD	b1424	0.15	-0.8
1,495,129	+	mdoD	b1424	0.15	-0.1
1,495,447	+	mdoD	b1424	0.34	-0.1
1,495,518	+	mdoD	b1424	0.39	+0.4
1,495,518	+	mdoD	b1424	0.39	+0.1
1,495,604	-	mdoD	b1424	0.44	+0.4
1,495,604	-	mdoD	b1424	0.44	-0.5