Strain Fitness in Escherichia coli BW25113 around b1060

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
1,118,948	+	solA	b1059	0.23	+2.4
1,118,956	-	solA	b1059	0.24	+0.2
1,118,956	-	solA	b1059	0.24	-0.1
1,118,956	-	solA	b1059	0.24	+0.3
1,118,967	-	solA	b1059	0.25	-0.8
1,119,006	-	solA	b1059	0.28	-0.1
1,119,008	-	solA	b1059	0.28	+0.5
1,119,008	-	solA	b1059	0.28	+0.4
1,119,084	-	solA	b1059	0.35	-0.3
1,119,084	-	solA	b1059	0.35	-0.7
1,119,136	+	solA	b1059	0.40	+0.3
1,119,165	+	solA	b1059	0.42	+1.0
1,119,165	+	solA	b1059	0.42	-1.0
1,119,179	-	solA	b1059	0.44	+0.1
1,119,179	-	solA	b1059	0.44	-0.6
1,119,244	+	solA	b1059	0.49	-0.4
1,119,552	+	solA	b1059	0.77	-0.3
1,119,579	+	solA	b1059	0.79	-0.7
1,119,584	-	solA	b1059	0.80	+1.1
1,119,612	+	solA	b1059	0.82	+0.6
1,119,618	+	solA	b1059	0.83	-0.6
1,119,623	-	solA	b1059	0.83	-0.7
1,119,634	-	solA	b1059	0.84	+0.6
1,119,690	+	solA	b1059	0.89	-0.1
1,119,699	+				-0.2
1,119,744	+				+0.0
1,119,744	+				+0.0
1,119,833	-				-0.7
1,119,838	-				-1.2
1,119,838	-				-0.2
1,119,865	-				+0.7
1,119,882	+				-0.1
1,119,882	+				-1.3
1,119,889	+				-1.6
1,119,891	-				-0.2
1,119,912	+				-3.1
1,119,921	+				-2.8
1,119,921	-				-1.2
1,119,925	-				-1.4
1,119,925	-				-1.2
1,119,929	-				-1.7
1,120,063	+	yceP	b1060	0.55	-2.7
1,120,100	+	yceP	b1060	0.69	-1.0
1,120,100	+	yceP	b1060	0.69	-2.8
1,120,120	+	yceP	b1060	0.77	-1.3
1,120,120	+	yceP	b1060	0.77	+1.2
1,120,120	+	yceP	b1060	0.77	-1.7
1,120,130	-	yceP	b1060	0.81	-1.1
1,120,134	+	yceP	b1060	0.82	-0.1
1,120,134	+	yceP	b1060	0.82	-1.4
1,120,135	-	yceP	b1060	0.83	-2.2
1,120,135	-				-0.4
1,120,136	-	yceP	b1060	0.83	-0.7
1,120,136	-	yceP	b1060	0.83	-1.6
1,120,140	-	yceP	b1060	0.85	-2.5
1,120,143	-	yceP	b1060	0.86	-2.3
1,120,143	-	yceP	b1060	0.86	+0.4
1,120,158	-				-0.7
1,120,176	+				+0.5
1,120,176	+				-0.1
1,120,216	-				+0.4
1,120,269	-				-1.5
1,120,276	-				-0.3
1,120,346	-				+1.0
1,120,539	-	dinI	b1061	0.30	-0.1
1,120,582	+	dinI	b1061	0.48	-2.7
1,120,631	-	dinI	b1061	0.67	-0.1
1,120,659	-	dinI	b1061	0.79	+0.0
1,120,670	-	dinI	b1061	0.83	+0.3
1,120,670	-	dinI	b1061	0.83	-0.3
1,120,852	-				-3.6
1,120,868	+				-4.6
1,120,917	+	pyrC	b1062	0.13	-2.5
1,120,985	-	pyrC	b1062	0.19	-4.4
1,120,985	-	pyrC	b1062	0.19	-4.4
1,121,019	+	pyrC	b1062	0.22	-5.8
1,121,059	+	pyrC	b1062	0.26	-2.2
1,121,073	-	pyrC	b1062	0.28	-3.5
1,121,073	-	pyrC	b1062	0.28	-5.5
1,121,123	+	pyrC	b1062	0.32	-3.5
1,121,123	+	pyrC	b1062	0.32	-3.8
1,121,174	-	pyrC	b1062	0.37	-4.4
1,121,174	-	pyrC	b1062	0.37	-4.6