Strain Fitness in Escherichia coli BW25113 around b1675

Experiment: Ying_OrganicAcid7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 3
1,751,957	-	ydhY	b1674	0.13	-0.2
1,752,011	+	ydhY	b1674	0.22	+2.1
1,752,012	-	ydhY	b1674	0.22	+0.3
1,752,017	-	ydhY	b1674	0.23	-0.7
1,752,022	-	ydhY	b1674	0.23	+0.2
1,752,022	-	ydhY	b1674	0.23	+0.1
1,752,035	-	ydhY	b1674	0.26	-0.4
1,752,120	-	ydhY	b1674	0.39	-0.5
1,752,237	-	ydhY	b1674	0.58	-0.3
1,752,261	+	ydhY	b1674	0.62	-0.6
1,752,262	-	ydhY	b1674	0.62	-0.1
1,752,262	-	ydhY	b1674	0.62	+0.1
1,752,262	-	ydhY	b1674	0.62	+0.8
1,752,262	-	ydhY	b1674	0.62	+1.1
1,752,291	+	ydhY	b1674	0.66	+0.1
1,752,316	-	ydhY	b1674	0.70	+0.3
1,752,319	+	ydhY	b1674	0.71	+2.1
1,752,377	-	ydhY	b1674	0.80	+1.6
1,752,410	+	ydhY	b1674	0.85	+0.3
1,752,411	+	ydhY	b1674	0.85	+0.6
1,752,455	+				+2.1
1,752,532	-				-0.0
1,752,539	-				+0.5
1,752,546	-				+0.1
1,752,566	-				+0.5
1,752,572	-				+0.8
1,752,574	-				-1.5
1,752,574	-				+1.1
1,752,593	-				+1.3
1,752,920	-				-1.3
1,752,934	-				+1.1
1,753,041	-	ydhZ	b1675	0.40	-0.7
1,753,125	-	ydhZ	b1675	0.80	-0.3
1,753,126	-	ydhZ	b1675	0.81	-0.1
1,753,141	+	ydhZ	b1675	0.88	-0.7
1,753,300	-				-0.3
1,753,300	-				+0.1
1,753,313	+				+0.8
1,753,334	+				-1.2
1,753,334	+				+0.5
1,753,334	+				+2.4
1,753,342	-				+0.3
1,753,342	-				-0.2
1,753,342	-				-0.1
1,753,358	+				-0.4
1,753,500	-				-0.3
1,753,500	-				-0.4
1,753,563	+				-0.5
1,753,582	+				-0.4
1,753,615	+				-0.4
1,753,635	-				-0.3
1,753,696	+				+0.1
1,753,710	-				+0.4
1,753,710	-				-1.2
1,753,836	-				+0.5
1,753,836	-				+0.5
1,753,921	+	pykF	b1676	0.14	-0.1
1,753,983	+	pykF	b1676	0.18	+0.9
1,754,072	+	pykF	b1676	0.25	+0.0
1,754,121	-	pykF	b1676	0.28	-1.0
1,754,121	-	pykF	b1676	0.28	-0.6