Strain Fitness in Escherichia coli BW25113 around b0912
Experiment: Ying_OrganicAcid7 rep B; time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Ying_OrganicAcid7 rep B; time point 3 |
|---|---|---|---|---|---|
| remove | |||||
| 963,138 | + | ihfB | b0912 | 0.31 | -4.6 |
| 963,207 | + | ihfB | b0912 | 0.55 | -3.2 |
| 963,207 | + | ihfB | b0912 | 0.55 | -5.2 |
| 963,215 | - | ihfB | b0912 | 0.58 | -3.5 |
| 963,239 | + | ihfB | b0912 | 0.66 | -3.9 |
| 963,294 | - | ihfB | b0912 | 0.85 | -4.6 |
| 963,529 | + | -0.1 | |||
| 963,568 | - | +0.3 | |||
| 963,679 | - | -0.5 | |||
| 963,779 | + | ycaI | b0913 | 0.10 | +0.2 |
| 963,962 | - | ycaI | b0913 | 0.18 | +0.0 |
| 964,099 | - | ycaI | b0913 | 0.25 | +0.4 |
| 964,255 | + | ycaI | b0913 | 0.31 | +0.1 |
Or see this region's nucleotide sequence