Strain Fitness in Escherichia coli BW25113 around b3231

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
3,375,353	+	sspA	b3229	0.86	-1.0
3,375,353	+	sspA	b3229	0.86	+1.0
3,375,515	-				-0.3
3,376,719	-				-0.4
3,376,719	-				-0.4
3,376,844	-				+0.6
3,376,845	-				-0.7
3,376,929	-				-0.5
3,377,108	+	yhcM	b3232	0.19	-2.5
3,377,108	+	yhcM	b3232	0.19	-3.6
3,377,130	-	yhcM	b3232	0.21	-3.6
3,377,162	-	yhcM	b3232	0.24	-1.9
3,377,182	-	yhcM	b3232	0.26	-1.6
3,377,191	+	yhcM	b3232	0.27	-2.5
3,377,191	+	yhcM	b3232	0.27	-1.9
3,377,193	+	yhcM	b3232	0.27	-2.3
3,377,193	+	yhcM	b3232	0.27	-3.3
3,377,283	+	yhcM	b3232	0.35	-1.4
3,377,296	-	yhcM	b3232	0.36	-2.4
3,377,296	-	yhcM	b3232	0.36	-1.6
3,377,299	+	yhcM	b3232	0.36	-1.6
3,377,375	-	yhcM	b3232	0.43	-1.9
3,377,375	-	yhcM	b3232	0.43	-2.1
3,377,375	-	yhcM	b3232	0.43	-2.5
3,377,375	-	yhcM	b3232	0.43	-2.3
3,377,375	-	yhcM	b3232	0.43	-0.8
3,377,375	-	yhcM	b3232	0.43	-0.7
3,377,412	+	yhcM	b3232	0.46	+0.1
3,377,412	+	yhcM	b3232	0.46	-0.4
3,377,514	+	yhcM	b3232	0.55	-2.2
3,377,516	-	yhcM	b3232	0.55	-1.5
3,377,520	-	yhcM	b3232	0.56	-2.0
3,377,520	-	yhcM	b3232	0.56	-2.2
3,377,651	+	yhcM	b3232	0.67	-2.3
3,377,652	+	yhcM	b3232	0.67	-2.3
3,377,652	+	yhcM	b3232	0.67	-2.5
3,377,659	+	yhcM	b3232	0.68	-2.5
3,377,668	-	yhcM	b3232	0.69	-1.4
3,377,668	-	yhcM	b3232	0.69	-1.9