Strain Fitness in Escherichia coli BW25113 around b2422

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
2,536,906	+	cysM	b2421	0.23	+0.8
2,537,014	-	cysM	b2421	0.35	+0.3
2,537,014	-	cysM	b2421	0.35	+1.0
2,537,041	+	cysM	b2421	0.38	+1.1
2,537,041	+	cysM	b2421	0.38	+0.9
2,537,148	+	cysM	b2421	0.50	+0.3
2,537,148	+	cysM	b2421	0.50	-0.0
2,537,578	+				+0.7
2,537,578	+				+1.0
2,537,849	+	cysA	b2422	0.10	-6.5
2,537,862	-	cysA	b2422	0.11	-3.1
2,537,903	-	cysA	b2422	0.15	-4.0
2,537,963	-	cysA	b2422	0.20	-5.6
2,538,033	+	cysA	b2422	0.27	-3.8
2,538,037	-	cysA	b2422	0.27	-3.3
2,538,054	-	cysA	b2422	0.29	-3.4
2,538,054	-	cysA	b2422	0.29	-4.4
2,538,084	-	cysA	b2422	0.31	-4.7
2,538,108	-	cysA	b2422	0.34	-5.4
2,538,114	+	cysA	b2422	0.34	-2.3
2,538,193	+	cysA	b2422	0.41	-2.2
2,538,193	+	cysA	b2422	0.41	-3.0
2,538,224	+	cysA	b2422	0.44	-2.6
2,538,224	+	cysA	b2422	0.44	-3.2
2,538,334	-	cysA	b2422	0.54	-4.3
2,538,334	-	cysA	b2422	0.54	-2.8
2,538,336	-	cysA	b2422	0.54	-4.2
2,538,699	+	cysA	b2422	0.87	-3.0
2,538,824	+				-3.2
2,538,824	+				-4.8
2,538,846	-				-0.1
2,538,846	-				-0.8
2,538,952	+	cysW	b2423	0.14	-3.4
2,538,952	+	cysW	b2423	0.14	-3.5
2,538,959	+	cysW	b2423	0.15	-2.7
2,538,961	+	cysW	b2423	0.15	-2.3
2,538,986	+	cysW	b2423	0.18	-3.9
2,539,072	+	cysW	b2423	0.28	-2.3
2,539,173	+	cysW	b2423	0.40	-2.0
2,539,173	+	cysW	b2423	0.40	-2.5
2,539,240	+	cysW	b2423	0.47	-3.4
2,539,249	-	cysW	b2423	0.48	-3.9
2,539,249	-	cysW	b2423	0.48	-3.4
2,539,456	+	cysW	b2423	0.72	-3.4
2,539,468	-	cysW	b2423	0.73	-1.6
2,539,468	-	cysW	b2423	0.73	-1.9
2,539,468	-	cysW	b2423	0.73	-5.1
2,539,694	-				-2.2