Strain Fitness in Escherichia coli BW25113 around b1882
Experiment: Ying_OrganicAcid7 rep A; time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_OrganicAcid7 rep A; time point 3 |
---|---|---|---|---|---|
remove | |||||
1,964,080 | + | flhB | b1880 | 0.88 | +0.2 |
1,964,080 | + | flhB | b1880 | 0.88 | +0.3 |
1,964,088 | + | flhB | b1880 | 0.89 | +0.8 |
1,964,507 | - | cheZ | b1881 | 0.14 | -0.4 |
1,964,609 | - | cheZ | b1881 | 0.30 | -0.5 |
1,964,847 | - | cheZ | b1881 | 0.67 | +0.1 |
1,964,889 | + | cheZ | b1881 | 0.73 | +0.3 |
1,965,270 | + | cheY | b1882 | 0.51 | -2.9 |
1,965,696 | - | cheB | b1883 | 0.21 | +0.1 |
1,965,815 | - | cheB | b1883 | 0.32 | +0.2 |
1,966,252 | + | cheB | b1883 | 0.74 | +0.6 |
1,966,273 | + | cheB | b1883 | 0.76 | +0.8 |
1,966,356 | - | cheB | b1883 | 0.84 | +0.8 |
Or see this region's nucleotide sequence