Strain Fitness in Escherichia coli BW25113 around b4232

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
4,451,646	+				-0.2
4,451,775	+	yjfF	b4231	0.17	-0.2
4,451,775	+	yjfF	b4231	0.17	+0.4
4,451,791	-	yjfF	b4231	0.19	-0.2
4,451,830	-	yjfF	b4231	0.22	-0.9
4,451,830	-	yjfF	b4231	0.22	+0.7
4,451,944	-	yjfF	b4231	0.34	-0.1
4,452,005	-	yjfF	b4231	0.40	-0.4
4,452,005	-	yjfF	b4231	0.40	-1.0
4,452,046	-	yjfF	b4231	0.44	+0.4
4,452,046	-	yjfF	b4231	0.44	-0.3
4,452,131	+	yjfF	b4231	0.53	-0.2
4,452,132	+	yjfF	b4231	0.53	+0.0
4,452,169	+	yjfF	b4231	0.57	+0.7
4,452,169	+	yjfF	b4231	0.57	+0.1
4,452,187	-	yjfF	b4231	0.58	-1.7
4,452,307	-	yjfF	b4231	0.70	+1.8
4,452,398	+	yjfF	b4231	0.80	+0.4
4,452,406	-	yjfF	b4231	0.80	+0.1
4,452,406	-	yjfF	b4231	0.80	+0.1
4,452,442	+	yjfF	b4231	0.84	+0.4
4,452,471	+	yjfF	b4231	0.87	+0.4
4,452,555	-				+1.3
4,452,623	+				-0.1
4,452,623	+				+0.3
4,452,627	-				+0.3
4,452,685	-				-4.6
4,452,709	+				-4.8
4,452,770	+	fbp	b4232	0.14	-3.2
4,452,867	-	fbp	b4232	0.23	-2.6
4,452,869	-	fbp	b4232	0.24	-3.6
4,452,869	-	fbp	b4232	0.24	-2.1
4,452,906	+	fbp	b4232	0.27	-3.5
4,452,926	+	fbp	b4232	0.29	-5.6
4,452,934	-	fbp	b4232	0.30	-4.2
4,452,971	+	fbp	b4232	0.34	-5.2
4,452,989	+	fbp	b4232	0.36	-4.0
4,452,989	+	fbp	b4232	0.36	-5.3
4,453,022	-	fbp	b4232	0.39	-6.4
4,453,102	+	fbp	b4232	0.47	-5.4
4,453,105	-	fbp	b4232	0.47	-4.0
4,453,132	-	fbp	b4232	0.50	-6.4
4,453,139	+	fbp	b4232	0.51	-4.8
4,453,147	+	fbp	b4232	0.51	-4.6
4,453,147	+	fbp	b4232	0.51	-3.7
4,453,147	+	fbp	b4232	0.51	-3.8
4,453,155	-	fbp	b4232	0.52	-4.2
4,453,155	-	fbp	b4232	0.52	-5.8
4,453,226	+	fbp	b4232	0.59	-5.6
4,453,289	+	fbp	b4232	0.66	-4.3
4,453,289	+	fbp	b4232	0.66	-4.6
4,453,289	+	fbp	b4232	0.66	-6.5
4,453,306	+	fbp	b4232	0.67	-5.3
4,453,314	-	fbp	b4232	0.68	-3.7
4,453,368	-	fbp	b4232	0.73	-2.8
4,453,368	-	fbp	b4232	0.73	-5.1
4,453,368	-	fbp	b4232	0.73	-3.9
4,453,374	-	fbp	b4232	0.74	-5.5
4,453,380	-	fbp	b4232	0.75	-4.7
4,453,380	-	fbp	b4232	0.75	-4.7
4,453,391	-	fbp	b4232	0.76	-5.6
4,453,456	+	fbp	b4232	0.82	-4.7
4,453,456	+	fbp	b4232	0.82	-4.1
4,453,508	-	fbp	b4232	0.87	-4.8
4,453,518	-	fbp	b4232	0.88	-5.4
4,453,532	-	fbp	b4232	0.90	-2.6
4,453,562	+				-3.5
4,453,569	+				-5.8
4,453,580	-				-4.3
4,453,580	-				-3.6
4,453,892	-				+0.3
4,454,033	-	mpl	b4233	0.16	+0.1
4,454,066	+	mpl	b4233	0.19	+0.2
4,454,066	+	mpl	b4233	0.19	-1.1
4,454,072	-	mpl	b4233	0.19	-0.1
4,454,082	-	mpl	b4233	0.20	+0.8
4,454,082	-	mpl	b4233	0.20	+0.3
4,454,086	-	mpl	b4233	0.20	+0.2
4,454,087	-	mpl	b4233	0.20	-0.6
4,454,087	-	mpl	b4233	0.20	+0.7
4,454,112	+	mpl	b4233	0.22	-0.7
4,454,120	+	mpl	b4233	0.23	-0.5
4,454,141	-	mpl	b4233	0.24	+0.6
4,454,141	-	mpl	b4233	0.24	+0.0
4,454,141	-	mpl	b4233	0.24	-0.7
4,454,143	+	mpl	b4233	0.24	+0.1
4,454,178	-	mpl	b4233	0.27	-0.1
4,454,186	-	mpl	b4233	0.28	-0.1
4,454,288	+	mpl	b4233	0.35	-0.4
4,454,296	-	mpl	b4233	0.36	+0.3
4,454,296	-	mpl	b4233	0.36	-0.2
4,454,317	+	mpl	b4233	0.37	-0.0
4,454,317	+	mpl	b4233	0.37	-1.5
4,454,348	-	mpl	b4233	0.39	-0.1
4,454,385	+	mpl	b4233	0.42	-0.6
4,454,506	+	mpl	b4233	0.51	+0.8
4,454,508	+	mpl	b4233	0.51	-0.3
4,454,508	+	mpl	b4233	0.51	-0.6
4,454,624	-	mpl	b4233	0.59	-1.4
4,454,624	-	mpl	b4233	0.59	-2.6