Strain Fitness in Escherichia coli BW25113 around b4053

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
4,263,790	+				-0.4
4,263,828	-				+0.2
4,263,828	-				+0.6
4,263,871	-				+0.9
4,263,919	+	alr	b4053	0.11	-0.1
4,263,928	-	alr	b4053	0.11	-1.0
4,264,017	+	alr	b4053	0.20	+0.9
4,264,017	+	alr	b4053	0.20	+0.2
4,264,102	-	alr	b4053	0.28	-0.3
4,264,142	-	alr	b4053	0.31	+0.4
4,264,146	-	alr	b4053	0.32	-0.2
4,264,146	-	alr	b4053	0.32	+1.0
4,264,220	-	alr	b4053	0.38	+0.5
4,264,232	+	alr	b4053	0.40	+0.0
4,264,240	-	alr	b4053	0.40	+0.2
4,264,240	-	alr	b4053	0.40	+0.2
4,264,240	-	alr	b4053	0.40	+0.6
4,264,240	-	alr	b4053	0.40	+0.2
4,264,266	+	alr	b4053	0.43	-0.3
4,264,406	-	alr	b4053	0.56	+0.2
4,264,406	-	alr	b4053	0.56	+0.1
4,264,424	+	alr	b4053	0.57	-0.5
4,264,462	+	alr	b4053	0.61	-0.3
4,264,525	-	alr	b4053	0.67	+0.1
4,264,525	-	alr	b4053	0.67	+1.7
4,264,525	-	alr	b4053	0.67	+0.4
4,264,525	-	alr	b4053	0.67	+0.4
4,264,620	+	alr	b4053	0.75	+0.3
4,264,620	+	alr	b4053	0.75	+0.9
4,264,639	-	alr	b4053	0.77	-0.3
4,264,658	+	alr	b4053	0.79	-1.8
4,264,658	+	alr	b4053	0.79	-0.4
4,264,661	+	alr	b4053	0.79	+0.2
4,264,661	+	alr	b4053	0.79	+0.8
4,264,661	-	alr	b4053	0.79	-0.1
4,264,664	-	alr	b4053	0.80	-0.4
4,264,722	-	alr	b4053	0.85	-0.9
4,264,729	+	alr	b4053	0.86	-0.0
4,264,806	-				-0.3
4,264,872	+				-0.5
4,264,872	+				+1.0
4,264,999	+				-0.9
4,265,008	-				+0.1
4,265,009	+				+0.9
4,265,009	+				+0.7
4,265,017	-				-1.2
4,265,035	-				+0.3
4,265,035	-				+0.7
4,265,063	-				+0.5
4,265,063	-				-0.2
4,265,081	-				-0.2
4,265,084	+				+0.1
4,265,097	-				-0.1
4,265,211	+				+0.2
4,265,211	+				+0.8
4,265,213	-				+0.4
4,265,244	+				+0.2
4,265,349	+	tyrB	b4054	0.18	+0.4
4,265,357	+	tyrB	b4054	0.18	+0.1
4,265,357	+	tyrB	b4054	0.18	-0.3
4,265,514	-	tyrB	b4054	0.32	-0.2
4,265,519	+	tyrB	b4054	0.32	-1.2
4,265,519	+	tyrB	b4054	0.32	+0.4
4,265,569	-	tyrB	b4054	0.36	-0.0
4,265,623	-	tyrB	b4054	0.41	-0.4
4,265,650	+	tyrB	b4054	0.43	+0.1
4,265,650	+	tyrB	b4054	0.43	+0.2
4,265,654	+	tyrB	b4054	0.43	+0.2
4,265,662	-	tyrB	b4054	0.44	+0.3
4,265,662	-	tyrB	b4054	0.44	+0.4
4,265,672	+	tyrB	b4054	0.45	-0.3
4,265,687	+	tyrB	b4054	0.46	+0.3
4,265,723	-	tyrB	b4054	0.49	+0.7
4,265,723	-	tyrB	b4054	0.49	-1.0
4,265,842	+	tyrB	b4054	0.59	-0.5
4,265,845	-	tyrB	b4054	0.59	-0.4