Strain Fitness in Escherichia coli BW25113 around b3811

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
3,993,601	+				-0.1
3,993,601	+				+0.4
3,993,637	+				-0.9
3,993,647	-				-2.1
3,993,778	-	yigA	b3810	0.24	-0.3
3,993,778	-	yigA	b3810	0.24	-0.4
3,993,782	-	yigA	b3810	0.25	-0.0
3,993,813	-	yigA	b3810	0.29	+0.2
3,993,813	-	yigA	b3810	0.29	+0.6
3,993,815	+	yigA	b3810	0.30	-0.7
3,993,827	+	yigA	b3810	0.31	-1.0
3,993,827	+	yigA	b3810	0.31	-0.5
3,993,829	+	yigA	b3810	0.31	-0.1
3,993,837	-	yigA	b3810	0.33	-1.6
3,993,837	-	yigA	b3810	0.33	-0.5
3,993,854	-	yigA	b3810	0.35	-0.6
3,993,892	-	yigA	b3810	0.40	-0.4
3,993,892	-	yigA	b3810	0.40	-1.1
3,993,948	-	yigA	b3810	0.48	-0.2
3,993,948	-	yigA	b3810	0.48	+0.4
3,993,972	-	yigA	b3810	0.52	-0.2
3,993,978	-	yigA	b3810	0.53	-0.0
3,994,051	-	yigA	b3810	0.63	-0.6
3,994,088	-	yigA	b3810	0.68	+0.4
3,994,090	+	yigA	b3810	0.68	-0.4
3,994,090	+	yigA	b3810	0.68	+0.1
3,994,093	-	yigA	b3810	0.69	-0.8
3,994,098	-	yigA	b3810	0.69	-0.8
3,994,098	-	yigA	b3810	0.69	-0.7
3,994,098	-	yigA	b3810	0.69	-0.7
3,994,098	-	yigA	b3810	0.69	+0.1
3,994,098	-	yigA	b3810	0.69	-0.1
3,994,098	-	yigA	b3810	0.69	-0.9
3,994,170	+	yigA	b3810	0.80	-0.9
3,994,192	+	yigA	b3810	0.83	-0.5
3,994,192	+	yigA	b3810	0.83	-1.8
3,994,202	+	yigA	b3810	0.84	+0.6
3,994,210	-	yigA	b3810	0.85	-0.2
3,994,279	-				-0.0
3,994,300	-				-1.0
3,994,300	-				-2.4
3,994,314	-				-0.5
3,994,318	+				+0.0
3,994,399	+				+0.8
3,994,765	+	xerC	b3811	0.51	-2.0
3,994,776	+	xerC	b3811	0.52	+0.9
3,994,932	+	xerC	b3811	0.69	+0.6
3,995,087	+	xerC	b3811	0.87	+0.9
3,995,093	-	xerC	b3811	0.87	+0.9
3,995,093	-	xerC	b3811	0.87	-1.5
3,995,095	-	xerC	b3811	0.88	+0.9
3,995,113	+	xerC	b3811	0.90	+1.7
3,995,165	+				-0.9
3,995,165	+				+1.7
3,995,246	+				-0.6
3,995,246	+				+0.3
3,995,251	+				-0.4
3,995,308	+	yigB	b3812	0.14	+0.2
3,995,308	+	yigB	b3812	0.14	+0.1
3,995,316	-	yigB	b3812	0.15	+0.0
3,995,338	+	yigB	b3812	0.18	+0.4
3,995,341	+	yigB	b3812	0.19	+0.1
3,995,351	-	yigB	b3812	0.20	-0.0
3,995,379	-	yigB	b3812	0.24	-0.4
3,995,391	-	yigB	b3812	0.26	-0.0
3,995,400	+	yigB	b3812	0.27	-0.5
3,995,567	+	yigB	b3812	0.50	-0.2
3,995,615	+	yigB	b3812	0.57	-1.0
3,995,615	+	yigB	b3812	0.57	-0.7
3,995,782	+	yigB	b3812	0.80	+0.1
3,995,826	-	yigB	b3812	0.86	+0.2
3,995,864	+				+0.4
3,995,875	-				-0.6
3,995,875	-				+0.6
3,995,950	-				+0.1
3,995,962	+				-0.0
3,996,013	+				+0.7
3,996,013	+				+0.2
3,996,013	+				-0.4
3,996,013	+				+0.6
3,996,013	+				-0.6
3,996,021	-				-0.0
3,996,037	+				-0.5
3,996,069	+				-1.0
3,996,095	+				-0.2
3,996,103	+				-0.3
3,996,111	-				-2.1
3,996,148	+				+0.4
3,996,150	+				-0.0
3,996,180	-				-0.5