Strain Fitness in Escherichia coli BW25113 around b3781

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
3,962,803	-	rhlB	b3780	0.33	+1.3
3,962,811	-	rhlB	b3780	0.33	+0.9
3,962,822	+	rhlB	b3780	0.34	+0.1
3,962,840	+	rhlB	b3780	0.36	-0.7
3,962,863	-	rhlB	b3780	0.38	-0.3
3,962,863	-	rhlB	b3780	0.38	+0.0
3,962,889	-	rhlB	b3780	0.40	+0.4
3,962,942	+	rhlB	b3780	0.44	+0.1
3,962,957	+	rhlB	b3780	0.45	-0.6
3,962,957	+	rhlB	b3780	0.45	-1.9
3,963,061	+	rhlB	b3780	0.53	-0.0
3,963,110	-	rhlB	b3780	0.57	+1.1
3,963,117	-	rhlB	b3780	0.58	+0.3
3,963,120	+	rhlB	b3780	0.58	+0.3
3,963,139	+	rhlB	b3780	0.59	-0.3
3,963,139	+	rhlB	b3780	0.59	-0.6
3,963,149	+	rhlB	b3780	0.60	-0.4
3,963,196	-	rhlB	b3780	0.64	-0.4
3,963,196	-	rhlB	b3780	0.64	+0.6
3,963,207	+	rhlB	b3780	0.65	-0.2
3,963,265	+	rhlB	b3780	0.69	+0.6
3,963,265	+	rhlB	b3780	0.69	+0.3
3,963,268	-	rhlB	b3780	0.70	-0.1
3,963,275	+	rhlB	b3780	0.70	+0.5
3,963,288	-	rhlB	b3780	0.71	-0.5
3,963,295	+	rhlB	b3780	0.72	+0.2
3,963,295	+	rhlB	b3780	0.72	-0.5
3,963,346	-	rhlB	b3780	0.76	+0.7
3,963,417	-	rhlB	b3780	0.81	-1.4
3,963,417	-	rhlB	b3780	0.81	+0.9
3,963,445	-	rhlB	b3780	0.83	+0.7
3,963,450	-	rhlB	b3780	0.84	+0.2
3,963,503	-	rhlB	b3780	0.88	+0.3
3,963,513	-	rhlB	b3780	0.89	+0.1
3,963,542	+				+0.8
3,963,542	+				+0.4
3,963,550	-				-0.2
3,963,553	+				-0.1
3,963,553	+				+0.4
3,963,561	-				+0.2
3,963,561	-				+0.3
3,963,605	-				+0.3
3,963,632	-				+1.4
3,963,655	+				+0.7
3,963,655	+				+0.1
3,963,694	-				-1.3
3,963,758	-				-0.7
3,963,764	-				-0.7
3,963,769	-				-0.6
3,963,780	+				-1.1
3,963,788	-				-1.3
3,963,788	-				-0.1
3,963,829	+				+0.8
3,963,837	-	trxA	b3781	0.16	+0.0
3,963,839	+	trxA	b3781	0.17	-1.3
3,963,856	-	trxA	b3781	0.22	-1.2
3,963,957	+	trxA	b3781	0.52	-1.3
3,963,975	+	trxA	b3781	0.58	-1.1
3,963,975	+	trxA	b3781	0.58	-1.7
3,963,975	+	trxA	b3781	0.58	-0.0
3,964,021	-	trxA	b3781	0.72	-0.3
3,964,026	-	trxA	b3781	0.73	-1.3
3,964,068	+	trxA	b3781	0.86	-0.6
3,964,068	+				-0.4
3,964,080	+	trxA	b3781	0.90	-0.3
3,964,110	-				-0.8
3,964,110	-				-1.6
3,964,155	+				+0.5
3,964,179	+				+0.2
3,964,254	+				-0.5
3,964,308	+				+0.9
3,964,318	-				-1.7
3,964,320	+				-0.6
3,964,320	+				-0.2
3,964,320	+				+0.0
3,964,355	+				-0.1
3,964,378	+				-0.2
3,964,386	-				+0.1
3,964,460	+				-1.5