Strain Fitness in Escherichia coli BW25113 around b3345

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
3,472,640	-				+0.5
3,472,640	-				-0.7
3,472,681	+				-0.1
3,472,681	-				+1.0
3,472,987	-				+0.2
3,472,987	-				-0.1
3,472,999	-				+0.1
3,473,352	+				+0.3
3,473,352	+				-0.1
3,473,745	+				-2.8
3,473,778	+				-1.0
3,473,784	+				-0.3
3,473,788	+				+0.6
3,473,788	+				-2.2
3,473,788	+				-1.6
3,473,790	+				+0.4
3,473,798	-				-0.2
3,473,800	+				-1.0
3,473,809	-				-2.0
3,473,810	-				-0.1
3,473,913	-	yheO	b3346	0.24	-1.3
3,473,913	-	yheO	b3346	0.24	-0.2
3,473,920	-	yheO	b3346	0.25	-1.1
3,473,931	-	yheO	b3346	0.26	-0.4
3,474,071	-	yheO	b3346	0.46	-1.2
3,474,072	-	yheO	b3346	0.46	+0.2
3,474,097	-	yheO	b3346	0.49	+0.8
3,474,122	+	yheO	b3346	0.53	-1.1
3,474,181	+	yheO	b3346	0.61	-0.3
3,474,187	-	yheO	b3346	0.62	-0.7
3,474,205	-	yheO	b3346	0.64	-1.1
3,474,207	+	yheO	b3346	0.65	-0.8
3,474,207	-	yheO	b3346	0.65	-0.8
3,474,214	-	yheO	b3346	0.66	+0.2
3,474,251	+	yheO	b3346	0.71	-0.1
3,474,251	+	yheO	b3346	0.71	-1.2
3,474,257	-	yheO	b3346	0.72	-0.1
3,474,257	-	yheO	b3346	0.72	-0.3
3,474,272	-	yheO	b3346	0.74	-0.9
3,474,350	-	yheO	b3346	0.84	-0.5
3,474,350	-	yheO	b3346	0.84	-0.6
3,474,360	-	yheO	b3346	0.86	-0.2
3,474,360	-	yheO	b3346	0.86	-0.6
3,474,360	-	yheO	b3346	0.86	-0.8
3,474,404	-				-0.6
3,474,485	-				-0.6
3,474,507	-				-1.3
3,474,520	-				+0.7
3,474,520	-				-1.7
3,474,536	+				-0.0
3,474,536	+				-0.6
3,474,578	-				-0.7
3,474,578	-				-0.9
3,474,664	-				+0.6
3,474,675	+				+0.2
3,474,689	-				+0.1
3,474,701	-				-0.3
3,474,702	-				+1.0
3,474,704	+				+0.2
3,474,722	-	fkpA	b3347	0.11	+0.2
3,474,735	-	fkpA	b3347	0.13	-0.1