Strain Fitness in Escherichia coli BW25113 around b2501

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
2,620,164	+				-3.6
2,620,164	+				-2.2
2,620,164	+				-3.5
2,620,175	+				-3.1
2,620,258	+				+0.0
2,620,258	+				+0.1
2,620,260	+				-4.8
2,620,422	-	purN	b2500	0.26	-5.9
2,620,451	+	purN	b2500	0.31	-2.6
2,620,459	-	purN	b2500	0.32	-5.6
2,620,470	-	purN	b2500	0.33	-5.1
2,620,604	+	purN	b2500	0.54	-4.2
2,620,651	+	purN	b2500	0.62	-3.4
2,620,651	+	purN	b2500	0.62	-4.2
2,620,661	-	purN	b2500	0.63	-4.0
2,620,744	+	purN	b2500	0.76	-3.9
2,620,873	+				+0.0
2,620,873	+				+0.3
2,620,899	-				+2.7
2,620,981	+				+0.5
2,620,981	+				+0.2
2,620,989	-				-0.1
2,620,989	-				+0.5
2,620,998	-				+0.9
2,621,024	-				+0.3
2,621,032	-				-1.9
2,621,041	-				-0.0
2,621,118	-				-3.9
2,621,325	-	ppk	b2501	0.13	-1.1
2,621,325	-	ppk	b2501	0.13	-2.5
2,621,444	+	ppk	b2501	0.18	-3.2
2,621,452	+	ppk	b2501	0.19	-3.4
2,621,521	+	ppk	b2501	0.22	-1.4
2,621,521	+	ppk	b2501	0.22	-1.9
2,621,586	-	ppk	b2501	0.25	-1.5
2,621,692	-	ppk	b2501	0.30	-2.7
2,621,786	-	ppk	b2501	0.35	-2.0
2,621,786	-	ppk	b2501	0.35	-2.8
2,621,808	+	ppk	b2501	0.36	-0.7
2,621,840	-	ppk	b2501	0.37	-2.2
2,621,840	-	ppk	b2501	0.37	-0.5
2,621,850	+	ppk	b2501	0.38	-1.0
2,621,850	+	ppk	b2501	0.38	-3.5
2,621,869	+	ppk	b2501	0.39	-0.5
2,621,869	+	ppk	b2501	0.39	+0.5
2,621,928	-	ppk	b2501	0.42	-0.9
2,622,104	-	ppk	b2501	0.50	-3.0
2,622,131	-	ppk	b2501	0.52	-2.4
2,622,137	-	ppk	b2501	0.52	-2.4
2,622,151	-	ppk	b2501	0.52	-1.5
2,622,151	-	ppk	b2501	0.52	-2.4
2,622,248	-	ppk	b2501	0.57	-1.6
2,622,268	-	ppk	b2501	0.58	-4.0
2,622,324	+	ppk	b2501	0.61	-1.4
2,622,329	+	ppk	b2501	0.61	-4.2
2,622,345	+	ppk	b2501	0.62	-4.0
2,622,388	-	ppk	b2501	0.64	-2.8
2,622,461	+	ppk	b2501	0.67	-3.2
2,622,461	+	ppk	b2501	0.67	-2.2
2,622,471	-	ppk	b2501	0.68	-4.9
2,622,550	-	ppk	b2501	0.72	-1.9
2,622,628	-	ppk	b2501	0.76	-3.3
2,622,647	+	ppk	b2501	0.76	-2.8
2,622,647	+	ppk	b2501	0.76	-1.7
2,622,667	-	ppk	b2501	0.77	-2.2
2,622,667	-	ppk	b2501	0.77	-0.5
2,622,702	-	ppk	b2501	0.79	-2.8
2,622,702	-	ppk	b2501	0.79	-0.2
2,622,720	-	ppk	b2501	0.80	-0.2
2,622,729	-	ppk	b2501	0.80	-5.1
2,622,782	-	ppk	b2501	0.83	-4.0
2,622,839	-	ppk	b2501	0.86	-2.7
2,622,897	-	ppk	b2501	0.89	-2.3
2,622,923	-	ppk	b2501	0.90	-2.0
2,623,010	+				-2.1
2,623,037	-				-2.0
2,623,112	-				-0.5
2,623,112	-				+0.4
2,623,135	-				-0.6
2,623,171	+				+0.8
2,623,220	-				+0.4
2,623,220	-				+1.6
2,623,304	-	ppx	b2502	0.11	-0.3
2,623,395	-	ppx	b2502	0.17	-0.0
2,623,398	-	ppx	b2502	0.17	+0.5
2,623,429	+	ppx	b2502	0.19	+0.3
2,623,532	-	ppx	b2502	0.26	+0.2
2,623,677	+	ppx	b2502	0.35	-0.2
2,623,677	+	ppx	b2502	0.35	+0.8
2,623,720	+	ppx	b2502	0.38	+0.8
2,623,720	+	ppx	b2502	0.38	-0.8
2,623,755	+	ppx	b2502	0.40	+0.5
2,623,755	+	ppx	b2502	0.40	+1.0
2,623,756	-	ppx	b2502	0.40	+1.0
2,623,769	-	ppx	b2502	0.41	+0.9
2,623,769	-	ppx	b2502	0.41	-0.0
2,623,941	+	ppx	b2502	0.52	+0.7
2,623,941	+	ppx	b2502	0.52	+0.5
2,623,942	-	ppx	b2502	0.52	+0.8
2,623,996	+	ppx	b2502	0.56	+0.7
2,624,019	-	ppx	b2502	0.57	+0.7
2,624,040	-				+0.5
2,624,040	-	ppx	b2502	0.59	+0.3
2,624,119	-	ppx	b2502	0.64	-0.1
2,624,127	+	ppx	b2502	0.64	+0.1