Strain Fitness in Escherichia coli BW25113 around b2366

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
2,476,287	+	dsdX	b2365	0.31	-0.7
2,476,309	-	dsdX	b2365	0.33	+0.2
2,476,316	+	dsdX	b2365	0.33	+0.1
2,476,316	+	dsdX	b2365	0.33	-0.2
2,476,438	+	dsdX	b2365	0.43	+2.0
2,476,507	-	dsdX	b2365	0.48	-0.7
2,476,507	-	dsdX	b2365	0.48	-0.3
2,476,599	-	dsdX	b2365	0.55	+0.2
2,476,628	+	dsdX	b2365	0.57	-0.3
2,476,630	+	dsdX	b2365	0.57	-0.4
2,476,642	+	dsdX	b2365	0.58	+0.7
2,476,656	+	dsdX	b2365	0.59	+0.6
2,476,656	+	dsdX	b2365	0.59	-0.4
2,476,684	+	dsdX	b2365	0.61	+0.5
2,476,729	+	dsdX	b2365	0.64	-0.0
2,476,729	+	dsdX	b2365	0.64	+0.4
2,476,730	+	dsdX	b2365	0.64	+0.5
2,476,730	+	dsdX	b2365	0.64	-0.1
2,476,745	-	dsdX	b2365	0.65	+0.3
2,476,870	-	dsdX	b2365	0.75	+0.0
2,476,942	+	dsdX	b2365	0.80	-0.3
2,476,979	+	dsdX	b2365	0.83	-0.6
2,476,999	-	dsdX	b2365	0.84	-0.6
2,476,999	-	dsdX	b2365	0.84	-1.3
2,477,071	-	dsdX	b2365	0.90	+0.4
2,477,098	+				-0.2
2,477,114	-				-0.5
2,477,114	-				+0.5
2,477,116	-				+0.6
2,477,131	+				-0.2
2,477,267	-				+0.1
2,477,298	-				+0.2
2,477,298	-				+0.8
2,477,311	-				+0.1
2,477,538	-	dsdA	b2366	0.24	-0.1
2,477,538	-	dsdA	b2366	0.24	-0.3
2,477,793	-	dsdA	b2366	0.43	-0.7
2,477,847	-	dsdA	b2366	0.47	-0.3
2,477,865	+	dsdA	b2366	0.48	+0.7
2,477,865	+	dsdA	b2366	0.48	-2.2
2,477,905	-	dsdA	b2366	0.51	+1.5
2,478,025	+	dsdA	b2366	0.60	-0.7
2,478,059	+	dsdA	b2366	0.63	-0.2
2,478,092	+	dsdA	b2366	0.65	+0.2
2,478,154	+	dsdA	b2366	0.70	+1.0
2,478,247	-	dsdA	b2366	0.77	+0.4
2,478,300	+	dsdA	b2366	0.81	-2.0
2,478,300	+	dsdA	b2366	0.81	+0.3
2,478,331	+	dsdA	b2366	0.83	-0.4
2,478,357	-	dsdA	b2366	0.85	-0.3
2,478,391	+	dsdA	b2366	0.88	-2.1
2,478,436	-				+0.5
2,478,436	-				+0.9
2,478,465	+				+0.2
2,478,499	+				-0.2
2,478,499	+				+0.4
2,478,556	+				-0.0
2,478,566	-				+0.9
2,478,571	+				+0.2
2,478,571	+				-1.7
2,478,576	-				-0.7
2,478,588	+				+0.9
2,478,591	+				+1.2
2,478,637	+				+1.5
2,478,637	+				-1.0
2,478,646	-				+1.2
2,478,648	+				-1.1
2,478,650	+				+0.4
2,478,782	-				+1.5
2,478,831	-	emrY	b2367	0.11	-0.0
2,478,894	-	emrY	b2367	0.15	+0.1
2,478,901	-	emrY	b2367	0.16	-0.9
2,478,903	-	emrY	b2367	0.16	+0.4
2,478,903	-	emrY	b2367	0.16	+0.6
2,478,908	-	emrY	b2367	0.16	-1.2
2,478,908	-	emrY	b2367	0.16	+1.7
2,478,908	-	emrY	b2367	0.16	-0.8
2,478,908	-	emrY	b2367	0.16	+0.7
2,478,909	-	emrY	b2367	0.16	+0.4
2,478,909	-	emrY	b2367	0.16	-1.2
2,478,911	-	emrY	b2367	0.16	+1.4
2,478,911	-	emrY	b2367	0.16	+1.9
2,478,927	-	emrY	b2367	0.17	+1.2
2,478,927	-	emrY	b2367	0.17	-0.3
2,478,927	-	emrY	b2367	0.17	+0.3
2,478,928	-	emrY	b2367	0.17	+0.2
2,478,930	-	emrY	b2367	0.18	+0.1
2,478,931	+	emrY	b2367	0.18	+2.5
2,478,941	+	emrY	b2367	0.18	+2.5
2,478,945	-	emrY	b2367	0.19	-0.8
2,478,945	-	emrY	b2367	0.19	-0.0
2,478,946	+	emrY	b2367	0.19	+2.5
2,478,953	-	emrY	b2367	0.19	+1.3
2,478,955	-	emrY	b2367	0.19	+0.2
2,478,963	-	emrY	b2367	0.20	+2.0
2,478,976	+	emrY	b2367	0.21	-2.3
2,478,994	-	emrY	b2367	0.22	-0.3
2,478,996	-	emrY	b2367	0.22	-0.7
2,478,996	-	emrY	b2367	0.22	+0.9
2,479,253	-	emrY	b2367	0.39	-1.1
2,479,275	-	emrY	b2367	0.40	+2.1
2,479,275	-	emrY	b2367	0.40	+0.9
2,479,504	-	emrY	b2367	0.55	+2.5