Strain Fitness in Escherichia coli BW25113 around b1679

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
1,755,985	-	ynhG	b1678	0.24	-0.3
1,755,985	-	ynhG	b1678	0.24	-1.4
1,756,008	+	ynhG	b1678	0.26	+0.8
1,756,008	+	ynhG	b1678	0.26	+0.1
1,756,016	+	ynhG	b1678	0.27	-0.2
1,756,016	-	ynhG	b1678	0.27	-0.3
1,756,016	-	ynhG	b1678	0.27	-0.2
1,756,080	+	ynhG	b1678	0.33	-0.1
1,756,080	+	ynhG	b1678	0.33	+0.4
1,756,151	-	ynhG	b1678	0.40	+0.1
1,756,195	-	ynhG	b1678	0.45	-0.1
1,756,211	+	ynhG	b1678	0.46	-0.3
1,756,285	-	ynhG	b1678	0.54	+0.3
1,756,285	-	ynhG	b1678	0.54	-0.2
1,756,445	-	ynhG	b1678	0.70	+0.4
1,756,470	+	ynhG	b1678	0.72	-0.4
1,756,612	+	ynhG	b1678	0.86	+0.0
1,756,620	-	ynhG	b1678	0.87	+0.1
1,756,620	-	ynhG	b1678	0.87	-0.3
1,756,800	+				-1.0
1,756,942	+	sufE	b1679	0.11	-1.0
1,756,962	-	sufE	b1679	0.15	-1.8
1,756,962	-	sufE	b1679	0.15	-0.3
1,757,135	+	sufE	b1679	0.57	-2.2
1,757,374	-				-1.2
1,757,385	-				-1.0
1,757,459	+	sufS	b1680	0.11	-1.6
1,757,486	-	sufS	b1680	0.13	-0.7
1,757,561	-	sufS	b1680	0.19	-0.7
1,757,561	-	sufS	b1680	0.19	-2.1
1,757,579	+	sufS	b1680	0.21	+1.6
1,757,579	+	sufS	b1680	0.21	+0.0
1,757,646	+	sufS	b1680	0.26	-0.2
1,757,646	+	sufS	b1680	0.26	-1.1
1,757,680	-	sufS	b1680	0.29	-2.3
1,757,680	-	sufS	b1680	0.29	-2.0
1,757,706	+	sufS	b1680	0.31	-1.5
1,757,706	+	sufS	b1680	0.31	-1.7
1,757,765	-	sufS	b1680	0.36	-1.0
1,757,775	-	sufS	b1680	0.37	-1.4
1,757,775	-	sufS	b1680	0.37	-1.6
1,758,135	-	sufS	b1680	0.66	-1.4
1,758,135	-	sufS	b1680	0.66	-0.8
1,758,168	+	sufS	b1680	0.69	-1.0