Strain Fitness in Escherichia coli BW25113 around b4415

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
606,060	+	ybdK	b0581	0.51	-0.1
606,095	+	ybdK	b0581	0.54	+0.4
606,095	+	ybdK	b0581	0.54	+0.0
606,317	-	ybdK	b0581	0.74	+0.1
606,367	-	ybdK	b0581	0.79	+0.2
606,498	+				+0.2
606,506	-				+0.0
606,516	-				-0.4
606,516	-				+0.9
606,602	+				-0.3
606,621	-				+0.3
606,673	+				-0.1
606,937	+				+0.7
606,988	+	sokE	b4700	0.53	-0.4
607,102	-	hokE	b4415	0.28	+0.0
607,105	-	hokE	b4415	0.30	+0.2
607,105	-	hokE	b4415	0.30	-0.3
607,122	+	hokE	b4415	0.41	+0.5
607,185	+	hokE	b4415	0.82	+0.2
607,210	-				-0.6
607,224	+				+0.2