Strain Fitness in Escherichia coli BW25113 around b2558

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,692,940	+	purL	b2557	0.84	-3.2
2,692,973	-	purL	b2557	0.85	-2.9
2,693,040	+	purL	b2557	0.86	-5.4
2,693,055	+	purL	b2557	0.87	-5.5
2,693,288	-				-1.3
2,693,315	+				-5.5
2,693,386	+				-4.3
2,693,577	+				-5.0
2,693,888	-				-0.4
2,693,888	-				-0.5
2,693,916	+				+0.5
2,693,916	+				-0.1
2,694,119	+	mltF	b2558	0.19	+0.4
2,694,152	+	mltF	b2558	0.21	+1.0
2,694,152	+	mltF	b2558	0.21	+0.6
2,694,152	+	mltF	b2558	0.21	-0.4
2,694,158	-	mltF	b2558	0.22	+0.2
2,694,158	-	mltF	b2558	0.22	+0.2
2,694,194	+	mltF	b2558	0.24	+0.4
2,694,194	+	mltF	b2558	0.24	+1.0
2,694,212	-	mltF	b2558	0.25	-0.0
2,694,212	-	mltF	b2558	0.25	+0.3
2,694,236	+	mltF	b2558	0.27	-0.3
2,694,252	-	mltF	b2558	0.28	+0.9
2,694,283	-	mltF	b2558	0.30	+0.1
2,694,290	+	mltF	b2558	0.30	+0.3
2,694,310	-	mltF	b2558	0.31	-0.9
2,694,319	-	mltF	b2558	0.32	-0.5
2,694,433	-	mltF	b2558	0.39	+0.3
2,694,438	+	mltF	b2558	0.39	-0.5
2,694,438	+	mltF	b2558	0.39	-2.3
2,694,592	+	mltF	b2558	0.49	+0.7
2,694,592	+	mltF	b2558	0.49	-0.4
2,694,611	+	mltF	b2558	0.51	-0.1
2,694,684	-	mltF	b2558	0.55	-0.5
2,694,692	+	mltF	b2558	0.56	+0.4
2,694,716	+	mltF	b2558	0.57	-0.2
2,694,791	+	mltF	b2558	0.62	+0.1
2,694,792	-	mltF	b2558	0.62	+0.6
2,694,824	+	mltF	b2558	0.64	-0.1
2,694,847	+	mltF	b2558	0.66	+0.1
2,694,891	-	mltF	b2558	0.69	-0.7
2,694,891	-	mltF	b2558	0.69	+0.1
2,694,931	-	mltF	b2558	0.71	-0.2
2,694,931	-	mltF	b2558	0.71	-0.2
2,694,969	+	mltF	b2558	0.74	-0.1
2,694,971	+	mltF	b2558	0.74	+0.7
2,694,976	+	mltF	b2558	0.74	+0.3
2,695,086	+	mltF	b2558	0.81	-0.3
2,695,109	+	mltF	b2558	0.83	-0.6
2,695,125	+	mltF	b2558	0.84	+0.2
2,695,138	-	mltF	b2558	0.84	+0.1
2,695,203	-	mltF	b2558	0.89	-0.3
2,695,203	-	mltF	b2558	0.89	+0.0
2,695,252	+				+0.0
2,695,252	+				-0.3
2,695,256	-				-0.1
2,695,260	-				+0.1
2,695,328	+				-0.1
2,695,365	-				-0.8
2,695,945	-				+1.6
2,695,945	-				+1.9
2,695,966	+				-0.5
2,695,966	+				+0.5
2,695,968	+				-0.6
2,695,968	+				-1.9
2,696,004	+	yfhB	b2560	0.11	+1.3
2,696,004	+	yfhB	b2560	0.11	-0.8
2,696,014	+	yfhB	b2560	0.12	-0.1
2,696,014	+	yfhB	b2560	0.12	-0.5
2,696,024	+	yfhB	b2560	0.14	+0.1
2,696,044	+	yfhB	b2560	0.17	+0.1
2,696,044	-	yfhB	b2560	0.17	+0.1
2,696,050	-	yfhB	b2560	0.18	-0.2
2,696,077	-	yfhB	b2560	0.22	-2.2
2,696,077	-	yfhB	b2560	0.22	+0.5
2,696,089	+	yfhB	b2560	0.24	+0.0
2,696,089	+	yfhB	b2560	0.24	-0.3
2,696,164	-	yfhB	b2560	0.36	-0.2