Strain Fitness in Escherichia coli BW25113 around b1682

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
1,758,821	-	sufD	b1681	0.22	-1.1
1,759,046	-	sufD	b1681	0.39	-1.4
1,759,046	-	sufD	b1681	0.39	-0.8
1,759,054	+	sufD	b1681	0.40	-0.8
1,759,134	+	sufD	b1681	0.46	-4.1
1,759,288	+	sufD	b1681	0.58	-1.6
1,759,296	-	sufD	b1681	0.59	-0.5
1,759,345	-	sufD	b1681	0.63	-1.9
1,759,576	-	sufD	b1681	0.81	-1.6
1,759,578	-	sufD	b1681	0.81	-1.3
1,759,578	-	sufD	b1681	0.81	-0.7
1,759,590	-	sufD	b1681	0.82	-1.6
1,759,590	-	sufD	b1681	0.82	-1.8
1,759,624	+	sufD	b1681	0.85	-2.3
1,759,624	+	sufD	b1681	0.85	-0.9
1,759,806	-				-1.7
1,759,806	-				-1.3
1,759,812	+				-3.3
1,759,812	+				-1.8
1,759,877	+	sufC	b1682	0.12	-1.4
1,759,902	-	sufC	b1682	0.15	-1.0
1,759,902	-	sufC	b1682	0.15	-2.0
1,759,907	-	sufC	b1682	0.16	-2.0
1,759,944	+	sufC	b1682	0.21	-0.7
1,759,944	+	sufC	b1682	0.21	-1.4
1,759,999	+	sufC	b1682	0.28	-1.1
1,760,009	-	sufC	b1682	0.29	-1.7
1,760,777	-	ynhE	b1683	0.16	-1.1
1,760,788	-	ynhE	b1683	0.16	-1.5
1,760,968	-	ynhE	b1683	0.28	-0.5
1,760,968	-	ynhE	b1683	0.28	-0.4
1,761,252	-	ynhE	b1683	0.47	-1.6
1,761,371	+	ynhE	b1683	0.55	-1.3
1,761,462	+	ynhE	b1683	0.62	-0.7