Strain Fitness in Escherichia coli BW25113 around b4544

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
2,369,668	+	arnT	b2257	0.45	+0.2
2,369,668	+	arnT	b2257	0.45	-1.2
2,369,742	+	arnT	b2257	0.49	+0.2
2,369,762	-	arnT	b2257	0.50	+1.1
2,369,762	-	arnT	b2257	0.50	-0.1
2,369,881	-	arnT	b2257	0.58	-0.2
2,370,286	-	arnT	b2257	0.82	-0.0
2,370,294	-	arnT	b2257	0.83	+0.4
2,370,308	+	arnT	b2257	0.83	-0.4
2,370,308	+	arnT	b2257	0.83	-1.5
2,370,326	-	arnT	b2257	0.84	+0.3
2,370,493	+				-0.0
2,370,551	+				-0.1
2,370,608	-				+0.3
2,370,715	+	yfbW	b4544	0.40	+0.4
2,370,722	-	yfbW	b4544	0.43	+0.6
2,370,723	-	yfbW	b4544	0.43	-0.2
2,370,723	-	yfbW	b4544	0.43	+0.7
2,370,747	+	yfbW	b4544	0.50	+0.9
2,370,747	+	yfbW	b4544	0.50	+0.2
2,370,909	+				+0.8
2,370,909	-				+0.1
2,370,911	+				-0.4
2,371,053	+	b2258	b2258	0.36	+0.3
2,371,397	-	pmrD	b2259	0.39	+0.1
2,371,562	-				+0.0
2,371,624	-				-0.4
2,371,624	-				-0.2
2,371,647	-				+0.0
2,371,755	-				+0.1
2,371,760	-				-0.5
2,371,831	-	menE	b2260	0.12	+0.0
2,371,831	-	menE	b2260	0.12	+0.5